RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CXCR1P25024 350 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 PAX6P26367 422 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 EVI2BP34910 448 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 IDH2P48735 452 aaKnown RBP2.4□□□□□ -2.03
CLK1-214ENST00000496205 PSMB2P49721 201 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 ACTBP60709 375 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 VBP1P61758 197 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 ARF6P62330 175 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 ACTG1P63261 375 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 IL5RAQ01344 420 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 IFITM3Q01628 133 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 DR1Q01658 176 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 SMARCB1Q12824 385 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 MADCAM1Q13477 382 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 ZNF266Q14584 549 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 TBC1D28Q2M2D7 210 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 TFDP3Q5H9I0 405 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 TTC32Q5I0X7 151 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 HHATQ5VTY9 493 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 LAMTOR1Q6IAA8 161 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 LYPD2Q6UXB3 125 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 RTL4Q6ZR62 310 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 C10orf107Q8IVU9 208 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 PRSS58Q8IYP2 241 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 ENTHD1Q8IYW4 607 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 GAPTQ8N292 157 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 COX18Q8N8Q8 333 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 Q8N9W7 124 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 OR10AD1Q8NGE0 317 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 STOML3Q8TAV4 291 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 SMIM12Q96EX1 92 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 KCTD7Q96MP8 289 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 Q96MT0 163 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 STACQ99469 402 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 HDHD3Q9BSH5 251 aaPredicted RBP2.4□□□□□ -2.03
CLK1-214ENST00000496205 TMED9Q9BVK6 235 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 SFXN3Q9BWM7 321 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 SLC25A2Q9BXI2 301 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 ARL6Q9H0F7 186 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 CDC42EP4Q9H3Q1 356 aaKnown RBP2.4□□□□□ -2.03
CLK1-214ENST00000496205 ZNF226Q9NYT6 803 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 PCYOX1Q9UHG3 505 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 NUFIP1Q9UHK0 495 aaKnown RBP2.4□□□□□ -2.03
CLK1-214ENST00000496205 CD84Q9UIB8 345 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 C3orf18Q9UK00 162 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 NDRG2Q9UN36 371 aaKnown RBP2.4□□□□□ -2.03
CLK1-214ENST00000496205 WDR62O43379 1518 aa2.4□□□□□ -2.03
CLK1-214ENST00000496205 IGHV3-64DA0A0J9YX35 117 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 PINLYPA6NC86 204 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 J3QT63 122 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 ACOX3O15254 700 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 STX10O60499 249 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 SS18L1O75177 396 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 DCTN3O75935 186 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 GLSO94925 669 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 ATP6V1G2O95670 118 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 SLC25A27O95847 323 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 FABP3P05413 133 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 PSG2P11465 335 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 ZNF7P17097 686 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 ATF1P18846 271 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 TCN2P20062 427 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 MDKP21741 143 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 OMGP23515 440 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 TALDO1P37837 337 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 CD79BP40259 229 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 CYB561P49447 251 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 ZNF133P52736 654 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 ZNF136P52737 540 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 ZNF138P52744 262 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 B2MP61769 119 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 CCL7P80098 99 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 SLC7A9P82251 487 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 LAMTOR4Q0VGL1 99 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 MLLT11Q13015 90 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 NAB1Q13506 487 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 TMED2Q15363 201 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 CEACAM16Q2WEN9 425 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 TCEAL5Q5H9L2 206 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 LRRN1Q6UXK5 716 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 NCCRP1Q6ZVX7 275 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 ZNF429Q86V71 674 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 BLIDQ8IZY5 108 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 LGI3Q8N145 548 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 OR6N1Q8NGY5 312 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 RXFP2Q8WXD0 754 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 TCEAL3Q969E4 200 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 RERGQ96A58 199 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 MRPL48Q96GC5 212 aaKnown RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 TMEM56Q96MV1 263 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 MBOAT7Q96N66 472 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 WFIKKN1Q96NZ8 548 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 BIRC8Q96P09 236 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 GPR22Q99680 433 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 DHRS9Q9BPW9 319 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 SLC25A39Q9BZJ4 359 aaPredicted RBP2.39□□□□□ -2.03
CLK1-214ENST00000496205 METTL9Q9H1A3 318 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 TMEM27Q9HBJ8 222 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 HEBP1Q9NRV9 189 aa2.39□□□□□ -2.03
CLK1-214ENST00000496205 ZNF337Q9Y3M9 751 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms