RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RHBDD3Q9Y3P4 386 aa6.01□□□□□ -1.45
USP39-219ENST00000496047 HSPB11Q9Y547 144 aa6.01□□□□□ -1.45
USP39-219ENST00000496047 ANKRD17O75179 2603 aaKnown RBP6□□□□□ -1.45
USP39-219ENST00000496047 IGKV1-9A0A0C4DH69 117 aa6□□□□□ -1.45
USP39-219ENST00000496047 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6□□□□□ -1.45
USP39-219ENST00000496047 A0A1B0GW55 424 aa6□□□□□ -1.45
USP39-219ENST00000496047 TMEM8BA6NDV4 472 aa6□□□□□ -1.45
USP39-219ENST00000496047 OR5B21A6NL26 309 aa6□□□□□ -1.45
USP39-219ENST00000496047 AHRRA9YTQ3 701 aa6□□□□□ -1.45
USP39-219ENST00000496047 TRAPPC2LH3BP13 241 aa6□□□□□ -1.45
USP39-219ENST00000496047 M0R233 179 aa6□□□□□ -1.45
USP39-219ENST00000496047 SOCS1O15524 211 aa6□□□□□ -1.45
USP39-219ENST00000496047 SLC22A5O76082 557 aa6□□□□□ -1.45
USP39-219ENST00000496047 IFNA7P01567 189 aa6□□□□□ -1.45
USP39-219ENST00000496047 TPOP07202 933 aa6□□□□□ -1.45
USP39-219ENST00000496047 DUX4L2P0CJ85 424 aa6□□□□□ -1.45
USP39-219ENST00000496047 DUX4L3P0CJ86 424 aa6□□□□□ -1.45
USP39-219ENST00000496047 DUX4L4P0CJ87 422 aa6□□□□□ -1.45
USP39-219ENST00000496047 DUX4L5P0CJ88 424 aa6□□□□□ -1.45
USP39-219ENST00000496047 DUX4L6P0CJ89 424 aa6□□□□□ -1.45
USP39-219ENST00000496047 DUX4L7P0CJ90 424 aa6□□□□□ -1.45
USP39-219ENST00000496047 NAT1P18440 290 aa6□□□□□ -1.45
USP39-219ENST00000496047 DTYMKP23919 212 aa6□□□□□ -1.45
USP39-219ENST00000496047 FPR2P25090 351 aa6□□□□□ -1.45
USP39-219ENST00000496047 COL8A1P27658 744 aa6□□□□□ -1.45
USP39-219ENST00000496047 HRH1P35367 487 aa6□□□□□ -1.45
USP39-219ENST00000496047 PTGER4P35408 488 aa6□□□□□ -1.45
USP39-219ENST00000496047 GLP1RP43220 463 aa6□□□□□ -1.45
USP39-219ENST00000496047 PER3P56645 1201 aa6□□□□□ -1.45
USP39-219ENST00000496047 FAM3AP98173 230 aa6□□□□□ -1.45
USP39-219ENST00000496047 ZNF92Q03936 586 aa6□□□□□ -1.45
USP39-219ENST00000496047 SURF2Q15527 256 aaPredicted RBP6□□□□□ -1.45
USP39-219ENST00000496047 C3AR1Q16581 482 aa6□□□□□ -1.45
USP39-219ENST00000496047 NKPD1Q17RQ9 610 aa6□□□□□ -1.45
USP39-219ENST00000496047 PLEKHN1Q494U1 663 aaPredicted RBP6□□□□□ -1.45
USP39-219ENST00000496047 TMEM255AQ5JRV8 349 aa6□□□□□ -1.45
USP39-219ENST00000496047 NKAPLQ5M9Q1 402 aa6□□□□□ -1.45
USP39-219ENST00000496047 TMEM42Q69YG0 159 aa6□□□□□ -1.45
USP39-219ENST00000496047 INO80CQ6PI98 192 aaPredicted RBP6□□□□□ -1.45
USP39-219ENST00000496047 FIP1L1Q6UN15 594 aaKnown RBP6□□□□□ -1.45
USP39-219ENST00000496047 LYG2Q86SG7 212 aa6□□□□□ -1.45
USP39-219ENST00000496047 CD163Q86VB7 1156 aa6□□□□□ -1.45
USP39-219ENST00000496047 C1orf174Q8IYL3 243 aa6□□□□□ -1.45
USP39-219ENST00000496047 FAM89BQ8N5H3 189 aa6□□□□□ -1.45
USP39-219ENST00000496047 UXS1Q8NBZ7 420 aa6□□□□□ -1.45
USP39-219ENST00000496047 C1orf162Q8NEQ5 155 aaPredicted RBP6□□□□□ -1.45
USP39-219ENST00000496047 OR2AK2Q8NG84 335 aa6□□□□□ -1.45
USP39-219ENST00000496047 COQ8AQ8NI60 647 aa6□□□□□ -1.45
USP39-219ENST00000496047 ARHGAP5-AS1Q96IT6 56 aa6□□□□□ -1.45
USP39-219ENST00000496047 Q96M66 194 aa6□□□□□ -1.45
USP39-219ENST00000496047 SLC6A7Q99884 636 aa6□□□□□ -1.45
USP39-219ENST00000496047 CMSS1Q9BQ75 279 aaKnown RBP6□□□□□ -1.45
USP39-219ENST00000496047 SOX7Q9BT81 388 aa6□□□□□ -1.45
USP39-219ENST00000496047 CHIAQ9BZP6 476 aa6□□□□□ -1.45
USP39-219ENST00000496047 TINAGL1Q9GZM7 467 aaPredicted RBP6□□□□□ -1.45
USP39-219ENST00000496047 PPA2Q9H2U2 334 aa6□□□□□ -1.45
USP39-219ENST00000496047 RHOFQ9HBH0 211 aa6□□□□□ -1.45
USP39-219ENST00000496047 ZNF286AQ9HBT8 521 aa6□□□□□ -1.45
USP39-219ENST00000496047 OBP2BQ9NPH6 170 aa6□□□□□ -1.45
USP39-219ENST00000496047 DLL4Q9NR61 685 aa6□□□□□ -1.45
USP39-219ENST00000496047 EHFQ9NZC4 300 aa6□□□□□ -1.45
USP39-219ENST00000496047 ZNF224Q9NZL3 707 aa6□□□□□ -1.45
USP39-219ENST00000496047 SPRR3Q9UBC9 169 aa6□□□□□ -1.45
USP39-219ENST00000496047 DUX4Q9UBX2 424 aa6□□□□□ -1.45
USP39-219ENST00000496047 ANAPC10Q9UM13 185 aa6□□□□□ -1.45
USP39-219ENST00000496047 MPC1Q9Y5U8 109 aa6□□□□□ -1.45
USP39-219ENST00000496047 NPTNQ9Y639 398 aa6□□□□□ -1.45
USP39-219ENST00000496047 CNOT1A5YKK6 2376 aaKnown RBP6□□□□□ -1.45
USP39-219ENST00000496047 MYO18BQ8IUG5 2567 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 TANC2Q9HCD6 1990 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 ZNF850A8MQ14 1090 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 MKRN2OSH3BPM6 223 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 L7N2F9 121 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 TSC22D2O75157 780 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 CEACAM4O75871 244 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PLATP00750 562 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 CST4P01036 141 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 HLA-HP01893 362 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PMP2P02689 132 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 CRHP06850 196 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PATE4P0C8F1 98 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PET100P0DJ07 73 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PGAM2P15259 253 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 TUBG1P23258 451 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PMELP40967 661 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 ZNF81P51508 661 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 SNU13P55769 128 aaKnown RBP5.99□□□□□ -1.45
USP39-219ENST00000496047 ZP1P60852 638 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 RAB14P61106 215 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 IL13RA1P78552 427 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 CYCSP99999 105 aaKnown RBP5.99□□□□□ -1.45
USP39-219ENST00000496047 MZT1Q08AG7 82 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PRDX4Q13162 271 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 GRK1Q15835 563 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 RSPO1Q2MKA7 263 aaPredicted RBP5.99□□□□□ -1.45
USP39-219ENST00000496047 COLCA1Q6ZS62 124 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 FAM214BQ7L5A3 538 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 NLRC3Q7RTR2 1065 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 SLC36A1Q7Z2H8 476 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 BIVMQ86UB2 503 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms