RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TBC1D28Q2M2D7 210 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 PABPC1L2AQ5JQF8 200 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 PAGE3Q5JUK9 113 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SPATA46Q5T0L3 261 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 REEP3Q6NUK4 255 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ZNF613Q6PF04 617 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SLC35D2Q76EJ3 337 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 CCDC80Q76M96 950 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 RANBP3LQ86VV4 465 aaPredicted RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 RBM45Q8IUH3 476 aaKnown RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 TEX29Q8N6K0 151 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ZNF283Q8N7M2 679 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 CLDN22Q8N7P3 220 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 OR6T1Q8NGN1 323 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 PFN4Q8NHR9 129 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ZNF519Q8TB69 540 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 NANPQ8TBE9 248 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SYNPRQ8TBG9 265 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 MRAPQ8TCY5 172 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ADAMTS16Q8TE57 1224 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 POP5Q969H6 163 aaKnown RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 MCHR2Q969V1 340 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 TAMM41Q96BW9 452 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SLC25A44Q96H78 314 aaPredicted RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 POM121L2Q96KW2 1035 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 CCT8L2Q96SF2 557 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SSX3Q99909 188 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 CITED1Q99966 193 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 TPPP3Q9BW30 176 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 BCL2L14Q9BZR8 327 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ARMC7Q9H6L4 198 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 EGLN3Q9H6Z9 239 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 RMND5AQ9H871 391 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 GORASP2Q9H8Y8 452 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 MMP26Q9NRE1 261 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SMPD3Q9NY59 655 aaPredicted RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 PLEK2Q9NYT0 353 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 RPS6KB2Q9UBS0 482 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ZMAT5Q9UDW3 170 aaKnown RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 ZNF229Q9UJW7 825 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 POFUT2Q9Y2G5 429 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ALMS1Q8TCU4 4167 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 PRORSD1PA6NEY8 169 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 CPSF4LA6NMK7 179 aaKnown RBP3.46□□□□□ -1.86
VPS52-222ENST00000495981 CEACAM18A8MTB9 384 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 CENPBD1B2RD01 187 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 FXYD1O00168 92 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 UBDO15205 165 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 RGS16O15492 202 aaPredicted RBP3.46□□□□□ -1.86
VPS52-222ENST00000495981 FOXH1O75593 365 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 TRMUO75648 421 aaKnown RBP3.46□□□□□ -1.86
VPS52-222ENST00000495981 PPP1R3DO95685 299 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 TXNDC12O95881 172 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 IGHG1P01857 330 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 MT-ND2P03891 347 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 SFTPBP07988 381 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ADORA3P0DMS8 318 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ANPEPP15144 967 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ZNF32P17041 273 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 GPX2P18283 190 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ATP4BP51164 291 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 MTPNP58546 118 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 IL24Q13007 206 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ZNF154Q13106 437 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 FHL1Q13642 323 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ENDOGQ14249 297 aaKnown RBP3.46□□□□□ -1.86
VPS52-222ENST00000495981 SLC9A3R2Q15599 337 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 DUSP7Q16829 419 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ANKRD55Q3KP44 614 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 SLC36A2Q495M3 483 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 TMEM155Q4W5P6 130 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 AGKQ53H12 422 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 TMEM41BQ5BJD5 291 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 PXDC1Q5TGL8 231 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 HHATQ5VTY9 493 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 LIPKQ5VXJ0 399 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 EPGNQ6UW88 154 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 Q6ZR03 302 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 C17orf107Q6ZR85 190 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 SLC16A14Q7RTX9 510 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ERASQ7Z444 233 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 NANOGNBQ7Z5D8 188 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 DPPA2Q7Z7J5 298 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 PARP8Q8N3A8 854 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 KIR3DL3Q8N743 410 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 SYT14Q8NB59 555 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 ADAD2Q8NCV1 583 aaKnown RBP3.46□□□□□ -1.86
VPS52-222ENST00000495981 AKR7LQ8NHP1 331 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 SLC25A40Q8TBP6 338 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 KLF14Q8TD94 323 aaPredicted RBP3.46□□□□□ -1.86
VPS52-222ENST00000495981 C10orf82Q8WW14 230 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 UPRTQ96BW1 309 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 TLCD1Q96CP7 247 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 TIMD4Q96H15 378 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 NEDD4LQ96PU5 975 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 MCHR1Q99705 422 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 EBF4Q9BQW3 602 aa3.46□□□□□ -1.86
VPS52-222ENST00000495981 SLC19A3Q9BZV2 496 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms