RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ZNF649Q9BS31 505 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 SEBOXQ9HB31 216 aaPredicted RBP10.66□□□□□ -0.7
COL1A1-209ENST00000495677 IL1RAPQ9NPH3 570 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 DPM3Q9P2X0 92 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 POLDIP2Q9Y2S7 368 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 SESN1Q9Y6P5 492 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 HUWE1Q7Z6Z7 4374 aaKnown RBP10.65□□□□□ -0.7
COL1A1-209ENST00000495677 DNAH1Q9P2D7 4330 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 HMGB1P1B2RPK0 211 aaPredicted RBP10.65□□□□□ -0.7
COL1A1-209ENST00000495677 J3QT63 122 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 DNAJC8O75937 253 aaPredicted RBP10.65□□□□□ -0.7
COL1A1-209ENST00000495677 IFNGP01579 166 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 COX4I1P13073 169 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 GSTT1P30711 240 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 HAAOP46952 286 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 RIPPLY1Q0D2K3 151 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 SAMD4BQ5PRF9 694 aaKnown RBP10.65□□□□□ -0.7
COL1A1-209ENST00000495677 MOB3CQ70IA8 216 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 TCF23Q7RTU1 214 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 TRPM8Q7Z2W7 1104 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 HDXQ7Z353 690 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 OR2W3Q7Z3T1 314 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 Q8NFD4 153 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 OR2T33Q8NG76 320 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 OR4Q3Q8NH05 313 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 FAM81AQ8TBF8 368 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 ZNF488Q96MN9 340 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 BTBD10Q9BSF8 475 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 TSSK6Q9BXA6 273 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 CLEC7AQ9BXN2 247 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 TMEM133Q9H2Q1 129 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 CMC2Q9NRP2 79 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 DNAJB9Q9UBS3 223 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 LINC00312Q9Y6C7 94 aa10.65□□□□□ -0.7
COL1A1-209ENST00000495677 hADV38S2A0JD32 116 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 GMNNO75496 209 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 NXPH2O95156 264 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 NRASP01111 189 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 GASTP01350 101 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 FABP3P05413 133 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 H2AFXP16104 143 aaPredicted RBP10.64□□□□□ -0.71
COL1A1-209ENST00000495677 ZNF3P17036 446 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 NUDT2P50583 147 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 ARHGDIBP52566 201 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 BDH1Q02338 343 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 DMRTC1Q5HYR2 192 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 PLBD1Q6P4A8 553 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 C8orf86Q6ZUL3 223 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 GDPD3Q7L5L3 318 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 RTN4RL2Q86UN3 420 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 OR8H2Q8N162 312 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 COMMD1Q8N668 190 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 ZNF676Q8N7Q3 588 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 CHPT1Q8WUD6 406 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 THEM6Q8WUY1 208 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 MCUR1Q96AQ8 359 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 SNX22Q96L94 193 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 OR14J1Q9UGF5 321 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 SLC22A13Q9Y226 551 aa10.64□□□□□ -0.71
COL1A1-209ENST00000495677 CSMD3Q7Z407 3707 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 GSC2O15499 205 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 CD24P25063 80 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 EDDM3BP56851 147 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 PLCXD3Q63HM9 321 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 TMEM42Q69YG0 159 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 CGB2Q6NT52 195 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 KCTD18Q6PI47 426 aaPredicted RBP10.63□□□□□ -0.71
COL1A1-209ENST00000495677 DEGS2Q6QHC5 323 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 OR9Q2Q8NGE9 314 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 ZNF596Q8TC21 504 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 ASCL2Q99929 193 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 PAPOLBQ9NRJ5 636 aaKnown RBP10.63□□□□□ -0.71
COL1A1-209ENST00000495677 ENPP5Q9UJA9 477 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 LYVE1Q9Y5Y7 322 aa10.63□□□□□ -0.71
COL1A1-209ENST00000495677 PQLC2LA1A4F0 135 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 RIIAD1A6NNX1 92 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 LEUTXA8MZ59 168 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 DLGAP1O14490 977 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 IGLV1-47P01700 117 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 LYL1P12980 280 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 PSME3P61289 254 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 SF3A3Q12874 501 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL1A1-209ENST00000495677 IL24Q13007 206 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 ZNF684Q5T5D7 378 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 OR52W1Q6IF63 320 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 C18orf65Q6ZTR6 163 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 ZNF329Q86UD4 541 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 THNSL2Q86YJ6 484 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 EGFL6Q8IUX8 553 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 ASCC1Q8N9N2 400 aaKnown RBP10.62□□□□□ -0.71
COL1A1-209ENST00000495677 CREB3L1Q96BA8 519 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 PKIBQ9C010 78 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 FAM206AQ9NX38 181 aa10.62□□□□□ -0.71
COL1A1-209ENST00000495677 NKX1-2Q9UD57 310 aaPredicted RBP10.62□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A18PA6NE21 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A16PA6NEW6 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM90A20PA6NIJ5 464 aa10.61□□□□□ -0.71
COL1A1-209ENST00000495677 FAM183AA6NL82 134 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms