RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 HIVEP1P15822 2718 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 MAP1AP78559 2803 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-235ENST00000495515 TRDV1A0A1B0GX56 115 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-235ENST00000495515 GABRPO00591 440 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 MAS1P04201 325 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 SRMP19623 302 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 FABP5Q01469 135 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 INSL4Q14641 139 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 CYB5R2Q6BCY4 276 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 FIP1L1Q6UN15 594 aaKnown RBP14.31□□□□□ -0.12
HDAC6-235ENST00000495515 ACP7Q6ZNF0 438 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 TMEM91Q6ZNR0 172 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 SLC36A1Q7Z2H8 476 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 OR8B3Q8NGG8 313 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 OR5D18Q8NGL1 313 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 SLAMF9Q96A28 289 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 NEIL1Q96FI4 390 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-235ENST00000495515 OR8B2Q96RD0 313 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 S100A13Q99584 98 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 DNTTIP1Q9H147 329 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 WDR13Q9H1Z4 485 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 SMURF1Q9HCE7 757 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 MTCH1Q9NZJ7 389 aa14.31□□□□□ -0.12
HDAC6-235ENST00000495515 IGHV3OR15-7A0A075B7D8 119 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 NKX6-3A6NJ46 265 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 TRIM64CA6NLI5 447 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 B4DSR2 109 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 ADAM20O43506 726 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 SPRY1O43609 319 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-235ENST00000495515 GYPAP02724 150 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 IL2RGP31785 369 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 ERVK11-1P61568 191 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 ESCO2Q56NI9 601 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 CD200R1LQ6Q8B3 271 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 JAGN1Q8N5M9 183 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 LINC01356Q8N9X3 169 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 PXT1Q8NFP0 134 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 TNFAIP8L1Q8WVP5 186 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 FOXRED1Q96CU9 486 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-235ENST00000495515 C1orf159Q96HA4 380 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 ZNF488Q96MN9 340 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 FAM192AQ9GZU8 254 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 SNTG1Q9NSN8 517 aa14.3□□□□□ -0.12
HDAC6-235ENST00000495515 FLNAP21333 2647 aaKnown RBP14.29□□□□□ -0.12
HDAC6-235ENST00000495515 MAGEA13PA6NCF6 341 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 OR2AT4A6NND4 320 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 F5H0A9 414 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-235ENST00000495515 FOXH1O75593 365 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 WNT2P09544 360 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 IGHV4-31P0DP07 118 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 JUNBP17275 347 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-235ENST00000495515 CALRP27797 417 aaKnown RBP14.29□□□□□ -0.12
HDAC6-235ENST00000495515 PTGFRP43088 359 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 NPY4RP50391 375 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 BMXP51813 675 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 GP2P55259 537 aaKnown RBP14.29□□□□□ -0.12
HDAC6-235ENST00000495515 ZP1P60852 638 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 HOXA4Q00056 320 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-235ENST00000495515 FAM27D1Q5T7N8 215 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 ATPAF1Q5TC12 328 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-235ENST00000495515 GLT8D1Q68CQ7 371 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 STUMQ69YW2 141 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 EMG1Q92979 244 aaKnown RBP14.29□□□□□ -0.12
HDAC6-235ENST00000495515 MED30Q96HR3 178 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 HES4Q9HCC6 221 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 PCDHB16Q9NRJ7 776 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 KAAG1Q9UBP8 84 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 GLS2Q9UI32 602 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 STUB1Q9UNE7 303 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 SSR3Q9UNL2 185 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 GSTK1Q9Y2Q3 226 aa14.29□□□□□ -0.12
HDAC6-235ENST00000495515 TMPRSS2O15393 492 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 ANGPTL7O43827 346 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-235ENST00000495515 KDM4BO94953 1096 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 KNG1P01042 644 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 CD36P16671 472 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 MYL9P24844 172 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 RANBP1P43487 201 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 GABRA2P47869 451 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 PITPNBP48739 271 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 PSMD7P51665 324 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 RSU1Q15404 277 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 TIMM50Q3ZCQ8 353 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 FAM58AQ8N1B3 248 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 OR5T2Q8NGG2 359 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 ANGPTL6Q8NI99 470 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 SEH1LQ96EE3 360 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 UQCC2Q9BRT2 126 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 MRPS26Q9BYN8 205 aaKnown RBP14.28□□□□□ -0.12
HDAC6-235ENST00000495515 ELL3Q9HB65 397 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-235ENST00000495515 EXOSC4Q9NPD3 245 aaKnown RBP14.28□□□□□ -0.12
HDAC6-235ENST00000495515 CLN8Q9UBY8 286 aa14.28□□□□□ -0.12
HDAC6-235ENST00000495515 FAM157AC9JC47 383 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 PDCD5O14737 125 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 TNFRSF13BO14836 293 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-235ENST00000495515 CD5LO43866 347 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 TGFAP01135 160 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 MSMBP08118 114 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms