RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FCGR1AP12314 374 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 SAA4P35542 130 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 UBE2V2Q15819 145 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 LY6EQ16553 131 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 ZIK1Q3SY52 487 aaPredicted RBP7.84□□□□□ -1.15
MSH5-218ENST00000494646 TP53I3Q53FA7 332 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 TMEM42Q69YG0 159 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 HCP5Q6MZN7 132 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 Q6ZSV7 163 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 CATSPERDQ86XM0 798 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 PRSS35Q8N3Z0 413 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 ITFG2Q969R8 447 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 METTL8Q9H825 291 aaKnown RBP7.84□□□□□ -1.15
MSH5-218ENST00000494646 MOB1AQ9H8S9 216 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 ZNRD1Q9P1U0 126 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 AASSQ9UDR5 926 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 ENOPH1Q9UHY7 261 aa7.84□□□□□ -1.15
MSH5-218ENST00000494646 SF3B6Q9Y3B4 125 aaKnown RBP7.84□□□□□ -1.15
MSH5-218ENST00000494646 ANKRD61A6NGH8 418 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 F8VVB4 439 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 F8VWA3 439 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 J3QT63 122 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 SLC1A7O00341 560 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 NOS1APO75052 506 aaPredicted RBP7.83□□□□□ -1.16
MSH5-218ENST00000494646 TK1P04183 234 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 PIPP12273 146 aaPredicted RBP7.83□□□□□ -1.16
MSH5-218ENST00000494646 CCL3L1P16619 93 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 FUT6P51993 359 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 RPL31P62899 125 aaKnown RBP7.83□□□□□ -1.16
MSH5-218ENST00000494646 ZNF85Q03923 595 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 SMIM21Q3B7S5 101 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 SLC35E4Q6ICL7 350 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 GDPGP1Q6ZNW5 385 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 ZNF561Q8N587 486 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 ZSCAN4Q8NAM6 433 aaPredicted RBP7.83□□□□□ -1.16
MSH5-218ENST00000494646 OR5D13Q8NGL4 314 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 OR8J1Q8NGP2 316 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 WFDC12Q8WWY7 111 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 SLAMF9Q96A28 289 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 SSX3Q99909 188 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 RBM4BQ9BQ04 359 aaKnown RBP7.83□□□□□ -1.16
MSH5-218ENST00000494646 RSRP1Q9BUV0 290 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 GABARAPL3Q9BY60 117 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 PLEKHA1Q9HB21 404 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 MTCH1Q9NZJ7 389 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 GNG8Q9UK08 70 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 SLC7A11Q9UPY5 501 aa7.83□□□□□ -1.16
MSH5-218ENST00000494646 PRKDCP78527 4128 aaKnown RBP7.83□□□□□ -1.16
MSH5-218ENST00000494646 IGKV1-27A0A075B6S5 117 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 TRBV23-1A0A0A0MS06 115 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 BTBD17A6NE02 478 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 H3BUX3 64 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 ENTPD6O75354 484 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 SULT1C4O75897 302 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 SERPINA3P01011 423 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 CALCBP10092 127 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 CCL1P22362 96 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 COX7A1P24310 79 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 CDC42P60953 191 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 COL10A1Q03692 680 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 ACSM1Q08AH1 577 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 ZNF273Q14593 569 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 NCR3LG1Q68D85 454 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 HIST2H2BDQ6DRA6 164 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 DHRS7BQ6IAN0 325 aaPredicted RBP7.82□□□□□ -1.16
MSH5-218ENST00000494646 ZNF782Q6ZMW2 699 aaPredicted RBP7.82□□□□□ -1.16
MSH5-218ENST00000494646 Q6ZSR3 168 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 EGFL6Q8IUX8 553 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 C11orf42Q8N5U0 333 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 RFKQ969G6 155 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 FGGYQ96C11 551 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 RNFT2Q96EX2 444 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 AJUBAQ96IF1 538 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 CITED1Q99966 193 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 NRIP2Q9BQI9 281 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 PPA2Q9H2U2 334 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 IMPAD1Q9NX62 359 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 VPREB3Q9UKI3 123 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 POLDIP2Q9Y2S7 368 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 TGP01266 2768 aa7.82□□□□□ -1.16
MSH5-218ENST00000494646 A0A1W2PPH5 198 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 DAPL1A0PJW8 107 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 CLPXO76031 633 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 SCGB1D2O95969 90 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 MPZP25189 248 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 DUSP1P28562 367 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 TGFBR2P37173 567 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 KIR3DL2P43630 455 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 RAB13P51153 203 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 BMXP51813 675 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 SNU13P55769 128 aaKnown RBP7.81□□□□□ -1.16
MSH5-218ENST00000494646 LGALS4P56470 323 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 OR12D2P58182 307 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 PROK1P58294 105 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 RPL15P61313 204 aaKnown RBP7.81□□□□□ -1.16
MSH5-218ENST00000494646 ERVK11-1P61568 191 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 DEFA6Q01524 100 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 TMED1Q13445 227 aa7.81□□□□□ -1.16
MSH5-218ENST00000494646 KPNB1Q14974 876 aaKnown RBP7.81□□□□□ -1.16
MSH5-218ENST00000494646 PLA1AQ53H76 456 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms