RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 F5H0A9 414 aaPredicted RBP12.01□□□□□ -0.49
VCP-207ENST00000493886 HPNP05981 417 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 FAHP16930 419 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 CALCRP30988 508 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 FAM189A2Q15884 450 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 RSPO4Q2I0M5 234 aaPredicted RBP12.01□□□□□ -0.49
VCP-207ENST00000493886 CEACAM16Q2WEN9 425 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 RIPPLY2Q5TAB7 128 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 ZNF774Q6NX45 483 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 Q6ZSR3 168 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.01□□□□□ -0.49
VCP-207ENST00000493886 TMEM185AQ8NFB2 350 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 FOXB1Q99853 325 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 OR10A2Q9H208 303 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 NCOR1P1Q9H4R4 102 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 BANF2Q9H503 90 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 GLS2Q9UI32 602 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 MED13Q9UHV7 2174 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 A0A0A6YYD4 124 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 C5orf51A6NDU8 294 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 CDC14BO60729 498 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 CHRM2P08172 466 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 UBBP0CG47 229 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 RPS27AP62979 156 aaKnown RBP12.01□□□□□ -0.49
VCP-207ENST00000493886 UBA52P62987 128 aaKnown RBP12.01□□□□□ -0.49
VCP-207ENST00000493886 DRAM2Q6UX65 266 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 HSD17B13Q7Z5P4 300 aaPredicted RBP12.01□□□□□ -0.49
VCP-207ENST00000493886 TGIF2LXQ8IUE1 241 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 MARCH1Q8TCQ1 289 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 NPRL2Q8WTW4 380 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 IP6K3Q96PC2 410 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 TTTY12Q9BZ98 90 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 MED9Q9NWA0 146 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 TNFSF18Q9UNG2 199 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 PIGLQ9Y2B2 252 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 FAM166BA8MTA8 275 aa12□□□□□ -0.49
VCP-207ENST00000493886 ZNF32P17041 273 aa12□□□□□ -0.49
VCP-207ENST00000493886 LHX2P50458 406 aa12□□□□□ -0.49
VCP-207ENST00000493886 SRYQ05066 204 aa12□□□□□ -0.49
VCP-207ENST00000493886 TRIP6Q15654 476 aaKnown RBP12□□□□□ -0.49
VCP-207ENST00000493886 KISS1Q15726 138 aa12□□□□□ -0.49
VCP-207ENST00000493886 UBE2V2Q15819 145 aa12□□□□□ -0.49
VCP-207ENST00000493886 IL22RA1Q8N6P7 574 aa12□□□□□ -0.49
VCP-207ENST00000493886 PNLDC1Q8NA58 520 aaKnown RBP12□□□□□ -0.49
VCP-207ENST00000493886 OR5D18Q8NGL1 313 aa12□□□□□ -0.49
VCP-207ENST00000493886 OR1F12Q8NHA8 337 aa12□□□□□ -0.49
VCP-207ENST00000493886 PP6455Q8WZ26 134 aa12□□□□□ -0.49
VCP-207ENST00000493886 WNT2BQ93097 391 aa12□□□□□ -0.49
VCP-207ENST00000493886 LRRC46Q96FV0 321 aa12□□□□□ -0.49
VCP-207ENST00000493886 TMEM59Q9BXS4 323 aa12□□□□□ -0.49
VCP-207ENST00000493886 CHST5Q9GZS9 411 aa12□□□□□ -0.49
VCP-207ENST00000493886 GPR35Q9HC97 309 aa12□□□□□ -0.49
VCP-207ENST00000493886 ASF1BQ9NVP2 202 aa12□□□□□ -0.49
VCP-207ENST00000493886 KCNK7Q9Y2U2 307 aa12□□□□□ -0.49
VCP-207ENST00000493886 C9orf170A2RU37 121 aa12□□□□□ -0.49
VCP-207ENST00000493886 PATE4P0C8F1 98 aa12□□□□□ -0.49
VCP-207ENST00000493886 ZBTB25P24278 435 aa12□□□□□ -0.49
VCP-207ENST00000493886 AGTR1P30556 359 aa12□□□□□ -0.49
VCP-207ENST00000493886 MAGEA5P43359 124 aa12□□□□□ -0.49
VCP-207ENST00000493886 CRIP3Q6Q6R5 217 aa12□□□□□ -0.49
VCP-207ENST00000493886 LYG2Q86SG7 212 aa12□□□□□ -0.49
VCP-207ENST00000493886 CCDC54Q8NEL0 328 aa12□□□□□ -0.49
VCP-207ENST00000493886 UNKLQ9H9P5 680 aaKnown RBP12□□□□□ -0.49
VCP-207ENST00000493886 FN3KRPQ9HA64 309 aa12□□□□□ -0.49
VCP-207ENST00000493886 RASL12Q9NYN1 266 aa12□□□□□ -0.49
VCP-207ENST00000493886 CRTAPO75718 401 aaPredicted RBP12□□□□□ -0.49
VCP-207ENST00000493886 IFNA6P05013 189 aa12□□□□□ -0.49
VCP-207ENST00000493886 CLDN18P56856 261 aa12□□□□□ -0.49
VCP-207ENST00000493886 MEF2DQ14814 521 aa12□□□□□ -0.49
VCP-207ENST00000493886 SAPCD1Q5SSQ6 148 aa12□□□□□ -0.49
VCP-207ENST00000493886 BPIFCQ8NFQ6 507 aa12□□□□□ -0.49
VCP-207ENST00000493886 OR10J5Q8NHC4 309 aa12□□□□□ -0.49
VCP-207ENST00000493886 TMEM45BQ96B21 275 aa12□□□□□ -0.49
VCP-207ENST00000493886 C10orf35Q96D05 121 aa12□□□□□ -0.49
VCP-207ENST00000493886 FER1L6-AS2Q96M78 137 aa12□□□□□ -0.49
VCP-207ENST00000493886 PRRT1Q99946 306 aa12□□□□□ -0.49
VCP-207ENST00000493886 SOCS1O15524 211 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 BCL2L11O43521 198 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 CD8AP01732 235 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 HGFACQ04756 655 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 KCNRGQ8N5I3 272 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 MAFIPQ8WZ33 124 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 C14orf144Q96I85 54 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 ADAT1Q9BUB4 502 aaKnown RBP11.99□□□□□ -0.49
VCP-207ENST00000493886 GHRLQ9UBU3 117 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 A0A0D9SG52 128 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 OR6C6A6NF89 314 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 TXNL1O43396 289 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 GALR2O43603 387 aaPredicted RBP11.99□□□□□ -0.49
VCP-207ENST00000493886 PTGFRP43088 359 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 NPY4RP50391 375 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 PSG4Q00888 419 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 PLGLB1Q02325 96 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 SLC9A3R2Q15599 337 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 SLC16A14Q7RTX9 510 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 TMEM251Q8N6I4 163 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 BHLHE23Q8NDY6 225 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 OR2AE1Q8NHA4 323 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms