RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 ADI1Q9BV57 179 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 CHIAQ9BZP6 476 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 PRDM13Q9H4Q3 707 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 UNKLQ9H9P5 680 aaKnown RBP8.75□□□□□ -1.01
COL6A3-214ENST00000493608 ZMAT3Q9HA38 289 aaKnown RBP8.75□□□□□ -1.01
COL6A3-214ENST00000493608 PLEKHA1Q9HB21 404 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 USE1Q9NZ43 259 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 OR14J1Q9UGF5 321 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 ZNF222Q9UK12 451 aa8.75□□□□□ -1.01
COL6A3-214ENST00000493608 DAPL1A0PJW8 107 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 ANKRD61A6NGH8 418 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 E9PQ18 207 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 RNASEK-C17orf49H0YIS7 233 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 J3QT63 122 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 SULT1C4O75897 302 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 NXPH2O95156 264 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 IGHV4-59P01825 116 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 PGA5P0DJD9 388 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 MDKP21741 143 aaPredicted RBP8.74□□□□□ -1.01
COL6A3-214ENST00000493608 CCL1P22362 96 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 PRDX2P32119 198 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 CAV3P56539 151 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 OR12D2P58182 307 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 ERVFRD-1P60508 538 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 TMED1Q13445 227 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 UBE2V2Q15819 145 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 Q6ZSR3 168 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 CMTM4Q8IZR5 234 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 FAM185AQ8N0U4 392 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 OR4M1Q8NGD0 313 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 C8orf46Q8TAG6 207 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 TRUB1Q8WWH5 349 aaKnown RBP8.74□□□□□ -1.01
COL6A3-214ENST00000493608 ITFG2Q969R8 447 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 S100A14Q9HCY8 104 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 AMBNQ9NP70 447 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 NOX4Q9NPH5 578 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 C19orf12Q9NSK7 152 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 RASL12Q9NYN1 266 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL6A3-214ENST00000493608 GMPPBQ9Y5P6 360 aa8.74□□□□□ -1.01
COL6A3-214ENST00000493608 IGKV1-27A0A075B6S5 117 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 LOC107986453A0A1B0GWG9 222 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 MEX3AA1L020 520 aaKnown RBP8.73□□□□□ -1.01
COL6A3-214ENST00000493608 DHRS7CA6NNS2 312 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 F8VVB4 439 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 F8VWA3 439 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 H0YAE9 185 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 J3QLW9 94 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 EBAG9O00559 213 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 BAG2O95816 211 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 CRYBA1P05813 215 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 ZNF19P17023 458 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 GP2P55259 537 aaKnown RBP8.73□□□□□ -1.01
COL6A3-214ENST00000493608 NANOS3P60323 173 aaKnown RBP8.73□□□□□ -1.01
COL6A3-214ENST00000493608 SNRPGP62308 76 aaKnown RBP8.73□□□□□ -1.01
COL6A3-214ENST00000493608 SMIM21Q3B7S5 101 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 FAM220AQ7Z4H9 259 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 LHFPL3Q86UP9 236 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 KRTAP19-1Q8IUB9 90 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 KIR3DL3Q8N743 410 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 TNFRSF14Q92956 283 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 SLAMF9Q96A28 289 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 LGALS12Q96DT0 336 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 SDSLQ96GA7 329 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 C9orf16Q9BUW7 83 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 ZNF747Q9BV97 191 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 SLC7A11Q9UPY5 501 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 FAM96BQ9Y3D0 163 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 DSCAML1Q8TD84 2053 aa8.73□□□□□ -1.01
COL6A3-214ENST00000493608 MEIOCA2RUB1 952 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 J3QRE1 110 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 SLC1A7O00341 560 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 NPFFO15130 113 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 NOS1APO75052 506 aaPredicted RBP8.72□□□□□ -1.01
COL6A3-214ENST00000493608 CALCBP10092 127 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 PIPP12273 146 aaPredicted RBP8.72□□□□□ -1.01
COL6A3-214ENST00000493608 EEF1B2P24534 225 aaKnown RBP8.72□□□□□ -1.01
COL6A3-214ENST00000493608 PAX6P26367 422 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 IER3P46695 156 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 ISL1P61371 349 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 SRSF4Q08170 494 aaKnown RBP8.72□□□□□ -1.01
COL6A3-214ENST00000493608 BLMHQ13867 455 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 SLC25A30Q5SVS4 291 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 MEDAGQ5VYS4 303 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 ZBTB49Q6ZSB9 765 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 MKXQ8IYA7 352 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 ENTHD1Q8IYW4 607 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 ACBD7Q8N6N7 88 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 OR2G2Q8NGZ5 317 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 OR10AC1Q8NH08 325 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 TBC1D15Q8TC07 691 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 C17orf50Q8WW18 174 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 SSMEM1Q8WWF3 244 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 FGGYQ96C11 551 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 ADAT3Q96EY9 351 aaPredicted RBP8.72□□□□□ -1.01
COL6A3-214ENST00000493608 NRIP2Q9BQI9 281 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 MTCH1Q9NZJ7 389 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 C1RLQ9NZP8 487 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 EXOGQ9Y2C4 368 aaKnown RBP8.72□□□□□ -1.01
COL6A3-214ENST00000493608 POLDIP2Q9Y2S7 368 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms