RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 BRD3OSQ6XYD6 125 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 FAM231DQ6ZW35 169 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 ZDHHC22Q8N966 263 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 OR4D6Q8NGJ1 314 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 OR13C9Q8NGT0 318 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 MITD1Q8WV92 249 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 TOP1MTQ969P6 601 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 CHRNA10Q9GZZ6 450 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 TDRD3Q9H7E2 651 aaKnown RBP2.05□□□□□ -2.08
CLK1-213ENST00000492793 SND1-IT1Q9HBX3 110 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 ABCB9Q9NP78 766 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 RBM22Q9NW64 420 aaKnown RBP eCLIP2.05□□□□□ -2.082e-10■■■■■ 47.5
CLK1-213ENST00000492793 NUP205Q92621 2012 aa2.05□□□□□ -2.08
CLK1-213ENST00000492793 A0A0J9YYE9 177 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 ANKRD20A5PA0PJZ0 165 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 C9JQL5 133 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 RFXANKO14593 260 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 KDELR3O43731 214 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 GMDSO60547 372 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 OR2A4O95047 310 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 KLHL2O95198 593 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 SNAI1O95863 264 aaPredicted RBP2.04□□□□□ -2.08
CLK1-213ENST00000492793 TRBC1P01850 177 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 ACOT2P49753 483 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 CARD18P57730 90 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 FMODQ06828 376 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 ELOCQ15369 112 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 FBXL19-AS1Q494R0 122 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 NKAIN1Q4KMZ8 207 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 TMEM69Q5SWH9 247 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 IDNKQ5T6J7 187 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 SYT6Q5T7P8 510 aaPredicted RBP2.04□□□□□ -2.08
CLK1-213ENST00000492793 UGT2A3Q6UWM9 527 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 ASCL4Q6XD76 172 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 CYP4Z2PQ8N1L4 340 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 ATPAF2Q8N5M1 289 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 OR4K2Q8NGD2 314 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 OR52K1Q8NGK4 314 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 OR5H2Q8NGV7 314 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 OR6N2Q8NGY6 317 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 FAM57AQ8TBR7 257 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 OR2A7Q96R45 310 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 SRRQ9GZT4 340 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 SDHAF3Q9NRP4 125 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 SDHAF2Q9NX18 166 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 AP3M1Q9Y2T2 418 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 CHTOPQ9Y3Y2 248 aaKnown RBP2.04□□□□□ -2.08
CLK1-213ENST00000492793 INSIG2Q9Y5U4 225 aa2.04□□□□□ -2.08
CLK1-213ENST00000492793 RPRD2Q5VT52 1461 aaKnown RBP2.03□□□□□ -2.08
CLK1-213ENST00000492793 IZUMO1RA6ND01 250 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 VGLL3A8MV65 326 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 K7EN84 100 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 M0R1B8 84 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 PRMT5O14744 637 aaPredicted RBP2.03□□□□□ -2.08
CLK1-213ENST00000492793 GATCO43716 136 aaKnown RBP2.03□□□□□ -2.08
CLK1-213ENST00000492793 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 KCNK2O95069 426 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 SNRPAP09012 282 aaKnown RBP2.03□□□□□ -2.08
CLK1-213ENST00000492793 OR5AC1P0C628 307 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 SLC6A1P30531 599 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 OR12D2P58182 307 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 DYNC1I2Q13409 638 aaKnown RBP2.03□□□□□ -2.08
CLK1-213ENST00000492793 SLC25A25Q6KCM7 469 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 ZNF773Q6PK81 442 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 FA2HQ7L5A8 372 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 PAGE2Q7Z2X7 111 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 NELFCDQ8IXH7 590 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 FAM58AQ8N1B3 248 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 CA13Q8N1Q1 262 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 ITLN2Q8WWU7 325 aaPredicted RBP2.03□□□□□ -2.08
CLK1-213ENST00000492793 ADTRPQ96IZ2 230 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 PPP1R36Q96LQ0 422 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 COPS4Q9BT78 406 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 MAP1LC3CQ9BXW4 147 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 PLA2G12AQ9BZM1 189 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 WDR55Q9H6Y2 383 aaPredicted RBP2.03□□□□□ -2.08
CLK1-213ENST00000492793 VSIRQ9H7M9 311 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 ANXA10Q9UJ72 324 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 ZNF780BQ9Y6R6 833 aa2.03□□□□□ -2.08
CLK1-213ENST00000492793 IGLV6-57P01721 117 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 RLN2P04090 185 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 CCDC172P0C7W6 258 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 ZNF35P13682 527 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 CPN2P22792 545 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 RANBP1P43487 201 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 GPR4P46093 362 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 SLC18A1P54219 525 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 IGFBP7Q16270 282 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 TTMPQ5BVD1 217 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 SPIN3Q5JUX0 258 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 LIN9Q5TKA1 542 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 FAM104BQ5XKR9 115 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 KCTD16Q68DU8 428 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 APOBEC3HQ6NTF7 200 aaKnown RBP2.02□□□□□ -2.09
CLK1-213ENST00000492793 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
CLK1-213ENST00000492793 PRNTQ86SH4 94 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 SETD3Q86TU7 594 aaPredicted RBP2.02□□□□□ -2.09
CLK1-213ENST00000492793 DOK4Q8TEW6 326 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 FXYD5Q96DB9 178 aa2.02□□□□□ -2.09
CLK1-213ENST00000492793 OTUB2Q96DC9 234 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms