RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TRIM45Q9H8W5 580 aaPredicted RBP2.25□□□□□ -2.05
SNX13-209ENST00000492626 XCL2Q9UBD3 114 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 NOTCH2Q04721 2471 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 KLF18A0A0U1RQI7 1052 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 SCELO95171 688 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 AQP2P41181 271 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 CLDN6P56747 220 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 STX17P56962 302 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 MYL6P60660 151 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 UBE2NP61088 152 aaKnown RBP2.25□□□□□ -2.05
SNX13-209ENST00000492626 IGLV3-21P80748 117 aaPredicted RBP2.25□□□□□ -2.05
SNX13-209ENST00000492626 ZNF266Q14584 549 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 GABRA6Q16445 453 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 CGB2Q6NT52 195 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 SLC35D2Q76EJ3 337 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 SPAG16Q8N0X2 631 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 EXOSC8Q96B26 276 aaKnown RBP2.25□□□□□ -2.05
SNX13-209ENST00000492626 DNAJC19Q96DA6 116 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 C8orf76Q96K31 380 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 COPS4Q9BT78 406 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 OR12D3Q9UGF7 316 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 LRRC42Q9Y546 428 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 V9GYY9 64 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 A0A0G2JN53 185 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 A0A1W2PPR1 153 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 C19orf84I3L1E1 186 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 PIRO00625 290 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 CD160O95971 181 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 EVI2BP34910 448 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 TALDO1P37837 337 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 CEACAM6P40199 344 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 CSKP41240 450 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 SLAQ13239 276 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 C16orf72Q14CZ0 275 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 CCDC58Q4VC31 144 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 OR2W3Q7Z3T1 314 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 COMTD1Q86VU5 262 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 KIF2BQ8N4N8 673 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 HSD17B11Q8NBQ5 300 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 OR4D6Q8NGJ1 314 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 NEIL3Q8TAT5 605 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 B9D2Q9BPU9 175 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 NUDT9Q9BW91 350 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 REG4Q9BYZ8 158 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 OR11A1Q9GZK7 315 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 KIR3DX1Q9H7L2 352 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 VNN3Q9NY84 501 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 TFR2Q9UP52 801 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 CCL26Q9Y258 94 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 KCNE3Q9Y6H6 103 aa2.25□□□□□ -2.05
SNX13-209ENST00000492626 DYSFO75923 2080 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 A0A1B0GVI7 797 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 ZNF233A6NK53 670 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 ZNF726A6NNF4 738 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 KDELR3O43731 214 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SUPT7LO94864 414 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 TDP2O95551 362 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 PTHP01270 115 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CSNK2A2P19784 350 aaPredicted RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 CD9P21926 228 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 GTF2H1P32780 548 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 TAF6P49848 677 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 FRMPD2BQ6IN97 320 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 TMPRSS11AQ6ZMR5 421 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 ZNF493Q6ZR52 646 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 ZNF621Q6ZSS3 439 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 OR52E2Q8NGJ4 325 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SUN5Q8TC36 379 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 MYDGFQ969H8 173 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CIB1Q99828 191 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 BBS2Q9BXC9 721 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 WDR55Q9H6Y2 383 aaPredicted RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 PATZ1Q9HBE1 687 aaKnown RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 TREM1Q9NP99 234 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SLCO1B3Q9NPD5 702 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 ZNF226Q9NYT6 803 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 ZNF107Q9UII5 783 aaPredicted RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 ZFP92A6NM28 416 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 GABARAPO95166 117 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SHBGP04278 402 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 OR8U9P0C7N5 309 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CHTF8P0CG12 524 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 TCP1P17987 556 aaKnown RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 P2RX1P51575 399 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CAV2P51636 162 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 NKX2-5P52952 324 aaPredicted RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 ARG2P78540 354 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CAPRIN1Q14444 709 aaKnown RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 RESP18Q5W5W9 173 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 STRADAQ7RTN6 431 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CLVS1Q8IUQ0 354 aaPredicted RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 OR8U1Q8NH10 309 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 RXFP2Q8WXD0 754 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CDKL2Q92772 493 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CREB3L1Q96BA8 519 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CEP170P1Q96L14 293 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CGREF1Q99674 301 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 ACP6Q9NPH0 428 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms