RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 M0R1W7 72 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 FADS2O95864 444 aaKnown RBP12.41□□□□□ -0.42
USP39-217ENST00000491659 ISG15P05161 165 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 EEF1B2P24534 225 aaKnown RBP12.41□□□□□ -0.42
USP39-217ENST00000491659 CCR9P51686 369 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 UBE2V2Q15819 145 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 FDX2Q6P4F2 183 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 METAP1DQ6UB28 335 aaPredicted RBP12.41□□□□□ -0.42
USP39-217ENST00000491659 Q6YL49 198 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 ANGPTL5Q86XS5 388 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 RDH10Q8IZV5 341 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 FAM185AQ8N0U4 392 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 BATF2Q8N1L9 274 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 TMEM86BQ8N661 226 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 RHOXF1Q8NHV9 184 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 RDH12Q96NR8 316 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 HES4Q9HCC6 221 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 INPP5EQ9NRR6 644 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 FAM118AQ9NWS6 357 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 FRRS1LQ9P0K9 344 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 OR14J1Q9UGF5 321 aa12.41□□□□□ -0.42
USP39-217ENST00000491659 CAB39Q9Y376 341 aaPredicted RBP12.41□□□□□ -0.42
USP39-217ENST00000491659 A0A0U1RQK1 487 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 A0A1W2PPH5 198 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 KNG1P01042 644 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 MELTFP08582 738 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 PRDX2P32119 198 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 CEBPDP49716 269 aaPredicted RBP12.4□□□□□ -0.42
USP39-217ENST00000491659 NANOS3P60323 173 aaKnown RBP12.4□□□□□ -0.42
USP39-217ENST00000491659 RAB40BQ12829 278 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 GALEQ14376 348 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 NCR3LG1Q68D85 454 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 C16orf87Q6PH81 154 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 SYS1Q8N2H4 156 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 CD177Q8N6Q3 437 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 TBC1D15Q8TC07 691 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
USP39-217ENST00000491659 PELI1Q96FA3 418 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 CEP19Q96LK0 163 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 METTL8Q9H825 291 aaKnown RBP12.4□□□□□ -0.42
USP39-217ENST00000491659 AMBNQ9NP70 447 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 TNFRSF19Q9NS68 423 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 HHLA2Q9UM44 414 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 FAM96BQ9Y3D0 163 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 RPL36Q9Y3U8 105 aaKnown RBP12.4□□□□□ -0.42
USP39-217ENST00000491659 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
USP39-217ENST00000491659 IGKV1-27A0A075B6S5 117 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 H0YAE9 185 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 CYB5AP00167 134 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 IGHA1P01876 353 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 OCM2P0CE71 109 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 OCMP0CE72 109 aaPredicted RBP12.39□□□□□ -0.43
USP39-217ENST00000491659 RBP2P50120 134 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 ATP1B3P54709 279 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 ERVK11-1P61568 191 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 MRPL28Q13084 256 aaKnown RBP12.39□□□□□ -0.43
USP39-217ENST00000491659 ALKBH1Q13686 389 aaKnown RBP12.39□□□□□ -0.43
USP39-217ENST00000491659 FIP1L1Q6UN15 594 aaKnown RBP12.39□□□□□ -0.43
USP39-217ENST00000491659 C1orf122Q6ZSJ8 110 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 UTS2BQ765I0 119 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 LHFPL3Q86UP9 236 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 Q8N7P7 452 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 ZNF676Q8N7Q3 588 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 DNAAF1Q8NEP3 725 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 OR13C3Q8NGS6 347 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 SSMEM1Q8WWF3 244 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 SLAMF9Q96A28 289 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 ADAT3Q96EY9 351 aaPredicted RBP12.39□□□□□ -0.43
USP39-217ENST00000491659 MYRFQ9Y2G1 1151 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 TENM1Q9UKZ4 2725 aa12.39□□□□□ -0.43
USP39-217ENST00000491659 RNASEK-C17orf49H0YIS7 233 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 NPFFO15130 113 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 CRYBA1P05813 215 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
USP39-217ENST00000491659 FBP1P09467 338 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 ATF1P18846 271 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 PRKACBP22694 351 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 AZGP1P25311 298 aaKnown RBP12.38□□□□□ -0.43
USP39-217ENST00000491659 POU3F4P49335 361 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 RPL31P62899 125 aaKnown RBP12.38□□□□□ -0.43
USP39-217ENST00000491659 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
USP39-217ENST00000491659 KLRD1Q13241 179 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 KLHL22Q53GT1 634 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 LHFPL2Q6ZUX7 228 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 SLC25A26Q70HW3 274 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 LDLRAD3Q86YD5 345 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 EGFL6Q8IUX8 553 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 MKXQ8IYA7 352 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 Q8IYB0 196 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 ASCC1Q8N9N2 400 aaKnown RBP12.38□□□□□ -0.43
USP39-217ENST00000491659 OR52I1Q8NGK6 324 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 OR5D13Q8NGL4 314 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 APH1BQ8WW43 257 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
USP39-217ENST00000491659 SPSB1Q96BD6 273 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 FGGYQ96C11 551 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 COMMD4Q9H0A8 199 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 FAM234AQ9H0X4 552 aa12.38□□□□□ -0.43
USP39-217ENST00000491659 C8orf4Q9NR00 106 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms