RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 A0A1W2PP11 408 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 hCG_1807616A0A1W2PRN6 198 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 H7C417 338 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 CTDSP2O14595 271 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 LDLRAD4O15165 306 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 RGS5O15539 181 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 ZNF780AO75290 641 aaPredicted RBP18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 SERPINA2P20848 420 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 NPBWR2P48146 333 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 UNC119Q13432 240 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 BATF2Q8N1L9 274 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 TMEM104Q8NE00 496 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 ERGIC1Q969X5 290 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 LURAP1Q96LR2 239 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 ZNF488Q96MN9 340 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 PPP1R3CQ9UQK1 317 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 NAV2Q8IVL1 2488 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 USF3Q68DE3 2245 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 CSMD2Q7Z408 3487 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 TMEM14DPA8MWL7 114 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 TRAPPC2LH3BP13 241 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 KDM4BO94953 1096 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 HPXP02790 462 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 BCL3P20749 454 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 CDKN1AP38936 164 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 PMELP40967 661 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 PLA2G7Q13093 441 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 SAMD12Q8N8I0 201 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 IGFBPL1Q8WX77 278 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 CEP19Q96LK0 163 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 CST11Q9H112 138 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 RBFOX1Q9NWB1 397 aaKnown RBP18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 FBLN5Q9UBX5 448 aa18.35■□□□□ 0.53
VCPKMT-204ENST00000491402 F8VVB4 439 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 F8VWA3 439 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 AKR7A2O43488 359 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 HPGDSO60760 199 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 CSTBP04080 98 aaKnown RBP18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 PGA5P0DJD9 388 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 RBMXP38159 391 aaKnown RBP18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 GPR176Q14439 515 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 OR2W3Q7Z3T1 314 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 KCNG3Q8TAE7 436 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 Q8TCH9 128 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 CCL19Q99731 98 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 TREM2Q9NZC2 230 aa18.34■□□□□ 0.53
VCPKMT-204ENST00000491402 PDZD2O15018 2839 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 OVOL3O00110 214 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 CRTAPO75718 401 aaPredicted RBP18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 HTR3BO95264 441 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 ACAA1P09110 424 aaPredicted RBP18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 CFHR2P36980 270 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 EFNB2P52799 333 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 LAX1Q8IWV1 398 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 POC1AQ8NBT0 407 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 LRRC29Q8WV35 223 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 SLC25A38Q96DW6 304 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 NRIP2Q9BQI9 281 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 BANF2Q9H503 90 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 PLEKHA6Q9Y2H5 1048 aa18.33■□□□□ 0.53
VCPKMT-204ENST00000491402 CDC14BO60729 498 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 NOS1APO75052 506 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 MGMTP16455 207 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 ERVK11-1P61568 191 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 ELP2Q6IA86 826 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 TGIF2LYQ8IUE0 185 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 Q8IYB0 196 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 PTX4Q96A99 478 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 TMEM59Q9BXS4 323 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 MIXL1Q9H2W2 232 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 CACNG2Q9Y698 323 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 C3orf80F5H4A9 247 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 MPIG6BO95866 241 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 GTF2F2P13984 249 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 HOXA4Q00056 320 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 UBE2NLQ5JXB2 153 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 CDH24Q86UP0 819 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 Q8NFD4 153 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 OR10Z1Q8NGY1 313 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 RHOFQ9HBH0 211 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 PCDHB16Q9NRJ7 776 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 RHBDL2Q9NX52 303 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 RAB22AQ9UL26 194 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 PEX16Q9Y5Y5 336 aa18.32■□□□□ 0.52
VCPKMT-204ENST00000491402 IGHV1-69-2A0A0G2JMI3 117 aa18.31■□□□□ 0.52
VCPKMT-204ENST00000491402 RAB6AP20340 208 aa18.31■□□□□ 0.52
VCPKMT-204ENST00000491402 GMFBP60983 142 aa18.31■□□□□ 0.52
VCPKMT-204ENST00000491402 GCSAMQ8N6F7 178 aa18.31■□□□□ 0.52
VCPKMT-204ENST00000491402 OR11L1Q8NGX0 322 aa18.31■□□□□ 0.52
VCPKMT-204ENST00000491402 NEU4Q8WWR8 484 aaPredicted RBP18.31■□□□□ 0.52
VCPKMT-204ENST00000491402 CSMD1Q96PZ7 3565 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 SRRM5B3KS81 715 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 NXPH2O95156 264 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 EIF4EP06730 217 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 S100A5P33763 92 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 ART1P52961 327 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 FGF12P61328 243 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 ZNF181Q2M3W8 571 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 LRRC28Q86X40 367 aaPredicted RBP18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 OSR2Q8N2R0 312 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms