RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 DHRS7BQ6IAN0 325 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 ZNF555Q8NEP9 628 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 OR14K1Q8NGZ2 314 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 PP6455Q8WZ26 134 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 SMPD3Q9NY59 655 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 OR14J1Q9UGF5 321 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 GNG8Q9UK08 70 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 IGKV1D-17A0A075B6S4 117 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 A0A1B0GW55 424 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DAPL1A0PJW8 107 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 PQLC2LA1A4F0 135 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 M0QZ24 198 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 TIMM23O14925 209 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 GPR137BO60478 399 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 FADS2O95864 444 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DUX4L2P0CJ85 424 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DUX4L3P0CJ86 424 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DUX4L4P0CJ87 422 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DUX4L5P0CJ88 424 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DUX4L6P0CJ89 424 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DUX4L7P0CJ90 424 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 PGA5P0DJD9 388 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 ZNF20P17024 532 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 TGFBR2P37173 567 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 ATP1B3P54709 279 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 ISL1P61371 349 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 IL24Q13007 206 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 ODF4Q2M2E3 257 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 MIDNQ504T8 468 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 LPCAT4Q643R3 524 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 TMEM42Q69YG0 159 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 BRICD5Q6PL45 260 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DUX4L9Q6RFH8 374 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 CALHM1Q8IU99 346 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 Q8IYB0 196 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 ENTHD1Q8IYW4 607 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 ACBD7Q8N6N7 88 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 RHOXF1Q8NHV9 184 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 PPP1R14AQ96A00 147 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 RAB18Q9NP72 206 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 DUX4Q9UBX2 424 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 EXOGQ9Y2C4 368 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 PCDHGB5Q9Y5G0 923 aa13.61□□□□□ -0.23
PDLIM2-217ENST00000491330 IRGMA1A4Y4 181 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 PRR32B1ATL7 298 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 J3QRE1 110 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 MAGEB4O15481 346 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 ANGPTL7O43827 346 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 ENTPD6O75354 484 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 BAG2O95816 211 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 IGHV4-59P01825 116 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 CHRM2P08172 466 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 GABRB1P18505 474 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 PRKACBP22694 351 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 ERVFRD-1P60508 538 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 RAB40BQ12829 278 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 ZIK1Q3SY52 487 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 TTC23Q5W5X9 447 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 FDX2Q6P4F2 183 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 GDPD3Q7L5L3 318 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 CATSPERDQ86XM0 798 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 MKXQ8IYA7 352 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 ASCC1Q8N9N2 400 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 PPP1R35Q8TAP8 253 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 TRMT10AQ8TBZ6 339 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 RNFT2Q96EX2 444 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 MBOAT4Q96T53 435 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 NRIP2Q9BQI9 281 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 MRPS18AQ9NVS2 196 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 FAM118AQ9NWS6 357 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 C1RLQ9NZP8 487 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 RPL36Q9Y3U8 105 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 RNF114Q9Y508 228 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 MAB21L2Q9Y586 359 aa13.6□□□□□ -0.23
PDLIM2-217ENST00000491330 A0A1B0GTI1 187 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 A0A1W2PRD5 423 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 A0A1W2PRF3 423 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 A0A1W2PRM7 423 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 RNASEK-C17orf49H0YIS7 233 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 ISG15P05161 165 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 SELLP14151 372 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 AMY2BP19961 511 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 SAA4P35542 130 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 CCR9P51686 369 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 ELF3P78545 371 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 IL18R1Q13478 541 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 KLHL22Q53GT1 634 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 DMRTC1Q5HYR2 192 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 SYS1Q8N2H4 156 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 FGFRL1Q8N441 504 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 SETD9Q8NE22 299 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 RORBQ92753 470 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 CEP19Q96LK0 163 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 SLC29A1Q99808 456 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 ZNRD1Q9P1U0 126 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 VPREB3Q9UKI3 123 aa13.59□□□□□ -0.23
PDLIM2-217ENST00000491330 SYNGR1O43759 233 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 HTR1AP08908 422 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 MPZP25189 248 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms