RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ADCK1Q86TW2 530 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 HAPLN4Q86UW8 402 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 FOXRED2Q8IWF2 684 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 OR1N2Q8NGR9 330 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 DLX4Q92988 240 aaPredicted RBP5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 EME1Q96AY2 570 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 SGK3Q96BR1 496 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 Q96M66 194 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF714Q96N38 554 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 GPX7Q96SL4 187 aaPredicted RBP5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 THAP7Q9BT49 309 aaPredicted RBP5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 C1orf21Q9H246 121 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 PPCSQ9HAB8 311 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 SH3GLB1Q9Y371 365 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 MPC1Q9Y5U8 109 aa5.45□□□□□ -1.54
PDLIM1-203ENST00000490391 CXorf65A6NEN9 183 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 NOTOA8MTQ0 251 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 LY6LH3BQJ8 138 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 K7N7A8 449 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 AP4M1O00189 453 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 SOCS2O14508 198 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF737O75373 536 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 TXNDC12O95881 172 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 IGLV1-51P01701 117 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ACKR3P25106 362 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 CRABP1P29762 137 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 RPS27P42677 84 aaKnown RBP5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 GPR12P47775 334 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 CENPAP49450 140 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 PRKXP51817 358 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 SLURP1P55000 103 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 FXYD6P3P58550 94 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ESRRGP62508 458 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 EWSR1Q01844 656 aaKnown RBP eCLIP5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 GABPB1Q06547 395 aaPredicted RBP5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 PRDX4Q13162 271 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 GPR139Q6DWJ6 353 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM53AQ6NSI3 398 aaPredicted RBP5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 CEMP1Q6PRD7 247 aaPredicted RBP5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 BAIAP2L2Q6UXY1 529 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ZBTB49Q6ZSB9 765 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 LINC00336Q6ZUF6 198 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 PRSS45Q7RTY3 260 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ZBTB46Q86UZ6 589 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 CATSPERDQ86XM0 798 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 THNSL2Q86YJ6 484 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 FUNDC1Q8IVP5 155 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ZDHHC21Q8IVQ6 265 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ZDHHC23Q8IYP9 409 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF676Q8N7Q3 588 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 CSNK2A3Q8NEV1 391 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 OR2AJ1Q8NGZ0 328 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ARPC1AQ92747 370 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 REEP6Q96HR9 211 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 OR51I2Q9H344 312 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF319Q9P2F9 582 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 PYCARDQ9ULZ3 195 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 CORO2BQ9UQ03 480 aa5.44□□□□□ -1.54
PDLIM1-203ENST00000490391 OR6C68A6NDL8 312 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF850A8MQ14 1090 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 EVPLLA8MZ36 301 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 LEUTXA8MZ59 168 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 CST4P01036 141 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 GPR4P46093 362 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 OR1E2P47887 323 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 GPM6AP51674 278 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 ARHGDIBP52566 201 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 SLC7A2P52569 658 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 CKAP4Q07065 602 aaKnown RBP5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 TIGD6Q17RP2 521 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 SMIM21Q3B7S5 101 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 SLC36A3Q495N2 470 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 ZBED5Q49AG3 693 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 TPTE2P1Q5T6R2 138 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 NANOGP8Q6NSW7 305 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 DNM1P34Q6PK57 102 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 DLEU7Q6UYE1 221 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 KCTD8Q6ZWB6 473 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 CCDC80Q76M96 950 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 KIRREL3Q8IZU9 778 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 LINC00471Q8N535 108 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 AQP3Q92482 292 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 RNF170Q96K19 258 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 UBE2E2Q96LR5 201 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 ZNF488Q96MN9 340 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 KCNJ15Q99712 375 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 NRIP2Q9BQI9 281 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 KRTAP3-1Q9BYR8 98 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 RASL12Q9NYN1 266 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 N6AMT1Q9Y5N5 214 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 CEPT1Q9Y6K0 416 aa5.43□□□□□ -1.54
PDLIM1-203ENST00000490391 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
PDLIM1-203ENST00000490391 A0A087WUU8 490 aa5.42□□□□□ -1.54
PDLIM1-203ENST00000490391 ARRDC5A6NEK1 342 aa5.42□□□□□ -1.54
PDLIM1-203ENST00000490391 BIRC5O15392 142 aa5.42□□□□□ -1.54
PDLIM1-203ENST00000490391 TBX1O43435 398 aa5.42□□□□□ -1.54
PDLIM1-203ENST00000490391 NDUFB2O95178 105 aa5.42□□□□□ -1.54
PDLIM1-203ENST00000490391 OR8U9P0C7N5 309 aa5.42□□□□□ -1.54
PDLIM1-203ENST00000490391 FAM106CPP0CH98 169 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms