RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 IFI44Q8TCB0 444 aa11.52□□□□□ -0.57
TNXB-206ENST00000490077 AKR1E2Q96JD6 320 aa11.52□□□□□ -0.57
TNXB-206ENST00000490077 ZNF488Q96MN9 340 aa11.52□□□□□ -0.57
TNXB-206ENST00000490077 ULBP2Q9BZM5 246 aa11.52□□□□□ -0.57
TNXB-206ENST00000490077 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.57
TNXB-206ENST00000490077 IGHV1-45A0A0A0MS14 117 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 NPIPA2E9PIF3 369 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 NPIPA3F8WFD2 350 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 BET1O15155 118 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 LILRA1O75019 489 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 TMEM33P57088 247 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 SPINK14Q6IE38 97 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 IP6K3Q96PC2 410 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 RHOFQ9HBH0 211 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 A0A1W2PPE3 182 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 MTRF1O75570 445 aaKnown RBP11.51□□□□□ -0.57
TNXB-206ENST00000490077 DHRS3O75911 302 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 CSTBP04080 98 aaKnown RBP11.51□□□□□ -0.57
TNXB-206ENST00000490077 OTX2P32243 289 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 PIGPP57054 158 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 TLE1Q04724 770 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 VAX1Q5SQQ9 334 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 SLC30A7Q8NEW0 376 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 OR10AD1Q8NGE0 317 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 OR5L2Q8NGL0 311 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 EMG1Q92979 244 aaKnown RBP11.51□□□□□ -0.57
TNXB-206ENST00000490077 NTNG2Q96CW9 530 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 PAPOLGQ9BWT3 736 aaKnown RBP11.51□□□□□ -0.57
TNXB-206ENST00000490077 MAGT1Q9H0U3 335 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 PCDHB16Q9NRJ7 776 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 UQCC1Q9NVA1 299 aa11.51□□□□□ -0.57
TNXB-206ENST00000490077 PURGQ9UJV8 347 aaKnown RBP11.51□□□□□ -0.57
TNXB-206ENST00000490077 TRBV6-7A0A0A0MS04 114 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 ZNF850A8MQ14 1090 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 MBPP02686 304 aaPredicted RBP11.5□□□□□ -0.57
TNXB-206ENST00000490077 CRYBA1P05813 215 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 CHRM2P08172 466 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 OR5H8P0DN80 308 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 SPP1P10451 314 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 LIFP15018 202 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 CCL1P22362 96 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 OMGP23515 440 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 FCGR2CP31995 323 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 FAM53AQ6NSI3 398 aaPredicted RBP11.5□□□□□ -0.57
TNXB-206ENST00000490077 PRSS54Q6PEW0 395 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 DHRS11Q6UWP2 260 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 ESX1Q8N693 406 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 RXFP4Q8TDU9 374 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 IMMP1LQ96LU5 166 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 GUCD1Q96NT3 240 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 NELFAQ9H3P2 528 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 TMEM100Q9NV29 134 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 USF3Q68DE3 2245 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 GSTP1P09211 210 aaKnown RBP11.5□□□□□ -0.57
TNXB-206ENST00000490077 TPT1P13693 172 aaKnown RBP11.5□□□□□ -0.57
TNXB-206ENST00000490077 HAGHLQ6PII5 290 aaPredicted RBP11.5□□□□□ -0.57
TNXB-206ENST00000490077 MEX3BQ6ZN04 569 aaKnown RBP11.5□□□□□ -0.57
TNXB-206ENST00000490077 HSD17B11Q8NBQ5 300 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
TNXB-206ENST00000490077 PIGCQ92535 297 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 NMES1Q9C002 83 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 CHRDQ9H2X0 955 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 FANCFQ9NPI8 374 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 ANAPC10Q9UM13 185 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 ONECUT2O95948 504 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 IGLV3-1P01715 115 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 PRF1P14222 555 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 SELEP16581 610 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 FPR2P25090 351 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 MPZP25189 248 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 PSG4Q00888 419 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 ECH1Q13011 328 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 HNF4GQ14541 408 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 LPCAT3Q6P1A2 487 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 SKA3Q8IX90 412 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 SLC22A8Q8TCC7 542 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 THRSPQ92748 146 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 CLCC1Q96S66 551 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 CHST5Q9GZS9 411 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 TAF9BQ9HBM6 251 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.5□□□□□ -0.57
TNXB-206ENST00000490077 FOXD3Q9UJU5 478 aaPredicted RBP11.5□□□□□ -0.57
TNXB-206ENST00000490077 DKKL1Q9UK85 242 aa11.5□□□□□ -0.57
TNXB-206ENST00000490077 WISP2O76076 250 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 FBP1P09467 338 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 SFTA3P0C7M3 94 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 JMJD7P0C870 316 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 PPT1P50897 306 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 F2RL1P55085 397 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 SLC22A25Q6T423 547 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 RBMS3Q6XE24 437 aaKnown RBP11.49□□□□□ -0.57
TNXB-206ENST00000490077 HDDC2Q7Z4H3 204 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 OIT3Q8WWZ8 545 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 HAS2Q92819 552 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 Q96M66 194 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 NECAB3Q96P71 396 aaPredicted RBP11.49□□□□□ -0.57
TNXB-206ENST00000490077 NAA11Q9BSU3 229 aaPredicted RBP11.49□□□□□ -0.57
TNXB-206ENST00000490077 PIGMQ9H3S5 423 aa11.49□□□□□ -0.57
TNXB-206ENST00000490077 LPAR3Q9UBY5 353 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms