RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PGRMC1O00264 195 aaKnown RBP2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC31A1O15431 190 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 IDH3BO43837 385 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 MGRN1O60291 552 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 CCNE2O96020 404 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 RENP00797 406 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 CALM1P0DP23 149 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 CALM2P0DP24 149 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 CALM3P0DP25 149 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 PRPS1L1P21108 318 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 WARSP23381 471 aaKnown RBP2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 KIR2DS2P43631 304 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 CBX5P45973 191 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 CAV2P51636 162 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 NDUFA8P51970 172 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 SNRPD1P62314 119 aaKnown RBP2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 ST3GAL4Q11206 333 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 TFDP2Q14188 446 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 FZD2Q14332 565 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 MICAQ29983 383 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 TBC1D28Q2M2D7 210 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 RFX4Q33E94 735 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 CNPY1Q3B7I2 92 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 TTMPQ5BVD1 217 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 SAXO2Q658L1 398 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 DNAJC24Q6P3W2 148 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 BAIAP2L2Q6UXY1 529 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 DENND4AQ7Z401 1863 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 FAM220AQ7Z4H9 259 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 RBBP6Q7Z6E9 1792 aaKnown RBP2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 PRSS58Q8IYP2 241 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 FAM71AQ8IYT1 594 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 C4orf32Q8N8J7 132 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 C11orf72Q8NBR9 251 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 ATP6V1C2Q8NEY4 427 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 OR2A1Q8NGT9 310 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 OR9G1Q8NH87 305 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 OR5AK3PQ8NH89 298 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 ERMNQ8TAM6 284 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 MCOLN3Q8TDD5 553 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 DNAJC19Q96DA6 116 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 RNF185Q96GF1 192 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 CCDC42Q96M95 316 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 TSNAXQ99598 290 aaKnown RBP2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 DHX35Q9H5Z1 703 aaKnown RBP2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 DOCK5Q9H7D0 1870 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 TREM2Q9NZC2 230 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 XCL2Q9UBD3 114 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 MTFP1Q9UDX5 166 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 VAX2Q9UIW0 290 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 UGT2A1Q9Y4X1 527 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 TET1Q8NFU7 2136 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 MYH7BA7E2Y1 1941 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 TRIOO75962 3097 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IGLV4-3A0A075B6K6 122 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IGHV1OR15-1A0A075B7D0 117 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IGHV3OR16-13A0A075B7E8 117 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TRAV9-2A0A087WT02 112 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 A0A087WWV3 80 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TGIF2-C20orf24A0A0A6YYL0 155 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 A0A1B0GTI1 187 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IQCMA0A1B0GVH7 501 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 OR2AT4A6NND4 320 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF487B1APH4 448 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 H0YJX3 145 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 H7C2Y5 167 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 M0QZ92 97 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 M0R1B8 84 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CCRL2O00421 344 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 KMOO15229 486 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC37A4O43826 429 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CDC40O60508 579 aaKnown RBP eCLIP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 HPGDSO60760 199 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF253O75346 499 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ASS1P00966 412 aaKnown RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 OR5H8P0DN80 308 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CD70P32970 193 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 MYCNOSP40205 109 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 PPICP45877 212 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 STC1P52823 247 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 DSCR10P59022 87 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IL5RAQ01344 420 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 RPL18AQ02543 176 aaKnown RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CKAP4Q07065 602 aaKnown RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CLINT1Q14677 625 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ARL6IP1Q15041 203 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IL17AQ16552 155 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 NHLRC3Q5JS37 347 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 MARC1Q5VT66 337 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 KDM4DQ6B0I6 523 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 HBMQ6B0K9 141 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SPOPLQ6IQ16 392 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 LCN12Q6JVE5 192 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 UNQ9370/PRO34162Q6UXP9 181 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 MRPL55Q7Z7F7 128 aaKnown RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 AKAP14Q86UN6 197 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 PPP1R27Q86WC6 154 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SKA3Q8IX90 412 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 NPWQ8N729 165 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms