RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 SLC1A7O00341 560 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 SIGLEC5O15389 551 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 NOS1APO75052 506 aaPredicted RBP11.08□□□□□ -0.64
CCL28-202ENST00000489442 VENTXO95231 258 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 GNAO1P09471 354 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 IGHV4-38-2P0DP08 117 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 SELLP14151 372 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 AMY2BP19961 511 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 MPZP25189 248 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 ETV1P50549 477 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 MTCP1P56278 107 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 IL24Q13007 206 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 SLC25A26Q70HW3 274 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 UTS2BQ765I0 119 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 CALHM1Q8IU99 346 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 CMTM4Q8IZR5 234 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 ZNRF1Q8ND25 227 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 DNAAF1Q8NEP3 725 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 OR51A4Q8NGJ6 313 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 OR10AC1Q8NH08 325 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 TSEN15Q8WW01 171 aaKnown RBP11.08□□□□□ -0.64
CCL28-202ENST00000489442 WDFY2Q96P53 400 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 ZNF649Q9BS31 505 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 OR14J1Q9UGF5 321 aa11.08□□□□□ -0.64
CCL28-202ENST00000489442 CAB39Q9Y376 341 aaPredicted RBP11.08□□□□□ -0.64
CCL28-202ENST00000489442 A0A1W2PQ09 198 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 EFCAB10A6NFE3 127 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 TRIM77I1YAP6 450 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 FCN3O75636 299 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 ZFPL1O95159 310 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 SFTPBP07988 381 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 ATF1P18846 271 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 AZGP1P25311 298 aaKnown RBP11.07□□□□□ -0.64
CCL28-202ENST00000489442 PRDX2P32119 198 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 POU3F4P49335 361 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 HILS1P60008 231 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 DGUOKQ16854 277 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 OR2G6Q5TZ20 316 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 PHC2Q8IXK0 858 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 MKXQ8IYA7 352 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 OR5D14Q8NGL3 314 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 SPATA3Q8NHX4 192 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 SLAMF9Q96A28 289 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 CEP19Q96LK0 163 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 PDCD1LG2Q9BQ51 273 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 NRIP2Q9BQI9 281 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 DCTN5Q9BTE1 182 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 C19orf24Q9BVV8 132 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 JAM3Q9BX67 310 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 DIMT1Q9UNQ2 313 aaKnown RBP11.07□□□□□ -0.64
CCL28-202ENST00000489442 DHDHQ9UQ10 334 aa11.07□□□□□ -0.64
CCL28-202ENST00000489442 IGKV1-27A0A075B6S5 117 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
CCL28-202ENST00000489442 CAV3P56539 151 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 ST3GAL4Q11206 333 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 PDCD1Q15116 288 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 CCDC58Q4VC31 144 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 RPL22L1Q6P5R6 122 aaKnown RBP11.06□□□□□ -0.64
CCL28-202ENST00000489442 LHFPL2Q6ZUX7 228 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 SERPINA12Q8IW75 414 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 BCL6BQ8N143 479 aaPredicted RBP11.06□□□□□ -0.64
CCL28-202ENST00000489442 STX19Q8N4C7 294 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 ZNF561Q8N587 486 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 SIGLECL1Q8N7X8 197 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 BPIFB6Q8NFQ5 453 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 OR13C9Q8NGT0 318 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 GGHQ92820 318 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 SPSB1Q96BD6 273 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 SDSLQ96GA7 329 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 OPALINQ96PE5 141 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 VCX3BQ9H321 246 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 ZCCHC4Q9H5U6 513 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 BABAM2Q9NXR7 383 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 ZNF222Q9UK12 451 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 MAB21L2Q9Y586 359 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 KPTNQ9Y664 436 aa11.06□□□□□ -0.64
CCL28-202ENST00000489442 IGKV1-9A0A0C4DH69 117 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 XPNPEP2O43895 674 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 KNG1P01042 644 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 CD2P06729 351 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 HCKP08631 526 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 CEBPDP49716 269 aaPredicted RBP11.05□□□□□ -0.64
CCL28-202ENST00000489442 BPIFB3P59826 476 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 BLMHQ13867 455 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 FIP1L1Q6UN15 594 aaKnown RBP11.05□□□□□ -0.64
CCL28-202ENST00000489442 BRD3OSQ6XYD6 125 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 Q8IYB0 196 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 CD177Q8N6Q3 437 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 LY6G5BQ8NDX9 201 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 ZFAND2BQ8WV99 257 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 GATAD2BQ8WXI9 593 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 TFAP2CQ92754 450 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 LHX4Q969G2 390 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 DMRTB1Q96MA1 342 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 TBX15Q96SF7 602 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 HES4Q9HCC6 221 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 MTCH1Q9NZJ7 389 aa11.05□□□□□ -0.64
CCL28-202ENST00000489442 CNOT2Q9NZN8 540 aaKnown RBP11.05□□□□□ -0.64
CCL28-202ENST00000489442 CLEC2DQ9UHP7 191 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms