RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 ASCC1Q8N9N2 400 aaKnown RBP9.64□□□□□ -0.87
SFXN3-207ENST00000489434 OR5M11Q96RB7 305 aa9.64□□□□□ -0.87
SFXN3-207ENST00000489434 TEAD3Q99594 435 aa9.64□□□□□ -0.87
SFXN3-207ENST00000489434 CITED2Q99967 270 aaPredicted RBP9.64□□□□□ -0.87
SFXN3-207ENST00000489434 NRIP2Q9BQI9 281 aa9.64□□□□□ -0.87
SFXN3-207ENST00000489434 CHID1Q9BWS9 393 aa9.64□□□□□ -0.87
SFXN3-207ENST00000489434 NUFIP1Q9UHK0 495 aaKnown RBP9.64□□□□□ -0.87
SFXN3-207ENST00000489434 MEGF11A6BM72 1044 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 A6NDX4 124 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 C17orf98A8MV24 154 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 LOC110117498-PIK3R3F6TDL0 507 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 K7N7A8 449 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 DLGAP1O14490 977 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 SYNGR1O43759 233 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 CD33P20138 364 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 SLC2A5P22732 501 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 VDAC2P45880 294 aaPredicted RBP9.63□□□□□ -0.87
SFXN3-207ENST00000489434 CEBPDP49716 269 aaPredicted RBP9.63□□□□□ -0.87
SFXN3-207ENST00000489434 RAB13P51153 203 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 HCCSP53701 268 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 CDK5Q00535 292 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 ZNF273Q14593 569 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 SNAPC1Q16533 368 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 BCL2L15Q5TBC7 163 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 ASRGL1Q7L266 308 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 BBS1Q8NFJ9 593 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 CAPSLQ8WWF8 208 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 PHF21AQ96BD5 680 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 OR8B4Q96RC9 309 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 MOB1AQ9H8S9 216 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 SLC22A13Q9Y226 551 aa9.63□□□□□ -0.87
SFXN3-207ENST00000489434 PQLC2LA1A4F0 135 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 DHRS7CA6NNS2 312 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 DNAJC8O75937 253 aaPredicted RBP9.62□□□□□ -0.87
SFXN3-207ENST00000489434 MRPL3P09001 348 aaKnown RBP9.62□□□□□ -0.87
SFXN3-207ENST00000489434 PF4V1P10720 104 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 ANXA8P13928 327 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 AZGP1P25311 298 aaKnown RBP9.62□□□□□ -0.87
SFXN3-207ENST00000489434 DYNLT3P51808 116 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 EDDM3BP56851 147 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 MS4A2Q01362 244 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 ZNF626Q68DY1 528 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 OR11H6Q8NGC7 330 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 CCDC124Q96CT7 223 aaKnown RBP9.62□□□□□ -0.87
SFXN3-207ENST00000489434 ASB9Q96DX5 294 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 NSL1Q96IY1 281 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 AKR1E2Q96JD6 320 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 CNN2Q99439 309 aaKnown RBP9.62□□□□□ -0.87
SFXN3-207ENST00000489434 PRRG3Q9BZD7 231 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.62□□□□□ -0.87
SFXN3-207ENST00000489434 GPR173Q9NS66 373 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 AURKAIP1Q9NWT8 199 aaPredicted RBP9.62□□□□□ -0.87
SFXN3-207ENST00000489434 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.62□□□□□ -0.87
SFXN3-207ENST00000489434 SLC7A11Q9UPY5 501 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 TENM3Q9P273 2699 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 DSCAML1Q8TD84 2053 aa9.62□□□□□ -0.87
SFXN3-207ENST00000489434 hADV38S2A0JD32 116 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 ODF3BA8MYP8 253 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 IGLV3-1P01715 115 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 TTRP02766 147 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 CHRM2P08172 466 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 IGHV1-8P0DP01 117 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 MPZP25189 248 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 DLX6P56179 175 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 COL10A1Q03692 680 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 MEF2CQ06413 473 aaPredicted RBP9.61□□□□□ -0.87
SFXN3-207ENST00000489434 SLC34A1Q06495 639 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 IL18R1Q13478 541 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 MINOS1Q5TGZ0 78 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 TMEM42Q69YG0 159 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 CCBE1Q6UXH8 406 aaPredicted RBP9.61□□□□□ -0.87
SFXN3-207ENST00000489434 ZBTB49Q6ZSB9 765 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 PIGWQ7Z7B1 504 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 DYNAPQ8N1N2 210 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 NDNFQ8TB73 568 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 DNAJC9Q8WXX5 260 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 ZNF714Q96N38 554 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 MNTQ99583 582 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 PKIBQ9C010 78 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 WNT10AQ9GZT5 417 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 PLEKHA1Q9HB21 404 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 SLC25A19Q9HC21 320 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 HES4Q9HCC6 221 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 TVP23BQ9NYZ1 205 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 DNAJB9Q9UBS3 223 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 HILPDAQ9Y5L2 63 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 SNX5Q9Y5X3 404 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 MINOS1-NBL1R4GNA1 71 aa9.61□□□□□ -0.87
SFXN3-207ENST00000489434 COL7A1Q02388 2944 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 FAM230AA0A1W2PPH8 454 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 A0A1W2PRX2 142 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 ADARB2-AS1A8MUL3 147 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 PF4P02776 101 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 ARHGDIBP52566 201 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 ACTA2P62736 377 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 GNGT1P63211 74 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 ACTG2P63267 376 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 ACTC1P68032 377 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 ACTA1P68133 377 aa9.6□□□□□ -0.87
SFXN3-207ENST00000489434 MFGE8Q08431 387 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms