RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 OR5D13Q8NGL4 314 aa9.75□□□□□ -0.85
CCHCR1-215ENST00000488920 LINC01006Q8NI28 216 aa9.75□□□□□ -0.85
CCHCR1-215ENST00000488920 RBM4BQ9BQ04 359 aaKnown RBP9.75□□□□□ -0.85
CCHCR1-215ENST00000488920 ADI1Q9BV57 179 aa9.75□□□□□ -0.85
CCHCR1-215ENST00000488920 OR14J1Q9UGF5 321 aa9.75□□□□□ -0.85
CCHCR1-215ENST00000488920 SLC7A11Q9UPY5 501 aa9.75□□□□□ -0.85
CCHCR1-215ENST00000488920 SF3B6Q9Y3B4 125 aaKnown RBP9.75□□□□□ -0.85
CCHCR1-215ENST00000488920 MEGF8Q7Z7M0 2845 aa9.75□□□□□ -0.85
CCHCR1-215ENST00000488920 F8VVB4 439 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 F8VWA3 439 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 WIPF1O43516 503 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 INMTO95050 263 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 MPZP25189 248 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 CDC42P60953 191 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 ERVK11-1P61568 191 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 ZNF85Q03923 595 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 ACSM1Q08AH1 577 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 TP53I3Q53FA7 332 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 BRICD5Q6PL45 260 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 Q6ZSV7 163 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 ZSCAN4Q8NAM6 433 aaPredicted RBP9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 RFKQ969G6 155 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 CITED1Q99966 193 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 PLEKHA1Q9HB21 404 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 HES4Q9HCC6 221 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 IMPAD1Q9NX62 359 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 GNG8Q9UK08 70 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 VPREB3Q9UKI3 123 aa9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.74□□□□□ -0.85
CCHCR1-215ENST00000488920 IGKV1-27A0A075B6S5 117 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 ENTPD6O75354 484 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 TK1P04183 234 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 PIPP12273 146 aaPredicted RBP9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 CCL3L1P16619 93 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 PAX6P26367 422 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 KIR3DL2P43630 455 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 IL24Q13007 206 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 TMED1Q13445 227 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 KPNB1Q14974 876 aaKnown RBP9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 ZIK1Q3SY52 487 aaPredicted RBP9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 MIDNQ504T8 468 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 DHRS7BQ6IAN0 325 aaPredicted RBP9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 C11orf42Q8N5U0 333 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 SLAMF9Q96A28 289 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 AJUBAQ96IF1 538 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 PKIBQ9C010 78 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 PPA2Q9H2U2 334 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 MTCH1Q9NZJ7 389 aa9.73□□□□□ -0.85
CCHCR1-215ENST00000488920 LOC107986453A0A1B0GWG9 222 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 A0A1W2PPH5 198 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 MEX3AA1L020 520 aaKnown RBP9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 H3BNX3 289 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 H3BUX3 64 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 EI24O14681 340 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 KCNAB3O43448 404 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 SERPINA3P01011 423 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 ALPLP05186 524 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 COX7A1P24310 79 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 TGFBR2P37173 567 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 FUT6P51993 359 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 PROK1P58294 105 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 ISL1P61371 349 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 COL10A1Q03692 680 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 ZNF273Q14593 569 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 SLC25A26Q70HW3 274 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 FAM220AQ7Z4H9 259 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 ASCC1Q8N9N2 400 aaKnown RBP9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 BEND2Q8NDZ0 799 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 OR5R1Q8NH85 324 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 TRUB1Q8WWH5 349 aaKnown RBP9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 RNFT2Q96EX2 444 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 CEP19Q96LK0 163 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 SSX3Q99909 188 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 C16orf95Q9H693 158 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 HEXA-AS1Q9H8Q6 139 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 AASSQ9UDR5 926 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 ORC6Q9Y5N6 252 aa9.72□□□□□ -0.85
CCHCR1-215ENST00000488920 hCG_1809904A0A1W2PP81 198 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 A0A1W2PPE2 198 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 A0A1W2PR64 198 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 A0A1W2PRV1 198 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 DAPL1A0PJW8 107 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 K7N7A8 449 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 GATBO75879 557 aaKnown RBP9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 CLPXO76031 633 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 CHRM2P08172 466 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 UBCP0CG48 685 aaKnown RBP9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 BMXP51813 675 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 OR12D2P58182 307 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 SNRPGP62308 76 aaKnown RBP9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 LY6EQ16553 131 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 SLC35E4Q6ICL7 350 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 ZNF782Q6ZMW2 699 aaPredicted RBP9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 EGFL6Q8IUX8 553 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 CCDC54Q8NEL0 328 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 OR2G2Q8NGZ5 317 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 PPP1R35Q8TAP8 253 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 FGGYQ96C11 551 aa9.71□□□□□ -0.86
CCHCR1-215ENST00000488920 ADAT3Q96EY9 351 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms