RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PRTN3P24158 256 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 TEAD1P28347 426 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 CX3CR1P49238 355 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 CDH4P55283 916 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 MYL6P60660 151 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 PLGLB1Q02325 96 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF92Q03936 586 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 ADIGQ0VDE8 80 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 MOBPQ13875 183 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 BEX5Q5H9J7 111 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 KDELC1Q6UW63 502 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 CRLF3Q8IUI8 442 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 PUSL1Q8N0Z8 303 aaKnown RBP2.39□□□□□ -2.03
ITGB1-214ENST00000488427 TEX29Q8N6K0 151 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 ZFP62Q8NB50 900 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-214ENST00000488427 KCTD4Q8WVF5 259 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 PLEKHA8Q96JA3 519 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 CAPZA3Q96KX2 299 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF382Q96SR6 550 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 RARRES2Q99969 163 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 CHMP4BQ9H444 224 aaKnown RBP2.39□□□□□ -2.03
ITGB1-214ENST00000488427 EXO5Q9H790 373 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 BEX1Q9HBH7 125 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF355PQ9NSJ1 428 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 HRASLS2Q9NWW9 162 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 C3orf18Q9UK00 162 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 VANGL2Q9ULK5 521 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 WIF1Q9Y5W5 379 aa2.39□□□□□ -2.03
ITGB1-214ENST00000488427 KIR2DL5BA0A0G2JN68 375 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 KIR2DL5BA0A0G2JPC4 375 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 FAM240BA0A1B0GVZ2 78 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 A0A1B0GX78 115 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 TSPAN11A1L157 253 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 GOLGA6L10A6NI86 522 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 OR52A4PA6NMU1 304 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 SNTNA6NMZ2 147 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 GOLGA6L19H0YKK7 550 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 RBFOX2O43251 390 aaKnown RBP eCLIP2.38□□□□□ -2.03
ITGB1-214ENST00000488427 PSTPIP1O43586 416 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 ZMPSTE24O75844 475 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 EPPINO95925 133 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 TNNI1P19237 187 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 GPR1P46091 355 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 NCBP2P52298 156 aaKnown RBP eCLIP2.38□□□□□ -2.03
ITGB1-214ENST00000488427 DAOAP59103 153 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 GTF2BQ00403 316 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 H3F3CQ6NXT2 135 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF836Q6ZNA1 936 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 RGS9BPQ6ZS82 235 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 RUFY3Q7L099 469 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF550Q7Z398 422 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 DHDDSQ86SQ9 333 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 SETD3Q86TU7 594 aaPredicted RBP2.38□□□□□ -2.03
ITGB1-214ENST00000488427 LHFPL3Q86UP9 236 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 KIR2DL5AQ8N109 375 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 ABHD3Q8WU67 409 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 ASZ1Q8WWH4 475 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 TMIGD2Q96BF3 282 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 SLC41A3Q96GZ6 507 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 TRIM62Q9BVG3 475 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 SLC25A2Q9BXI2 301 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 VCX2Q9H322 139 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 ANKRD19PQ9H560 264 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 PARVGQ9HBI0 331 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 STARD9Q9P2P6 4700 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 IKZF2Q9UKS7 526 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 KIAA1257Q9ULG3 409 aa2.38□□□□□ -2.03
ITGB1-214ENST00000488427 TMEM223A0PJW6 202 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 OR6C74A6NCV1 312 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF233A6NK53 670 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 GPR89AB7ZAQ6 455 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 NDUFS8O00217 210 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 SRP72O76094 671 aaKnown RBP2.37□□□□□ -2.03
ITGB1-214ENST00000488427 DEXIO95424 95 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 TLX1NBP0CAT3 122 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 GPR89BP0CG08 455 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 SLC2A3P11169 496 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 OR1E1P30953 314 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 CSNK1A1P48729 337 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 RORCP51449 518 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 EMP2P54851 167 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 IFT88Q13099 833 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 DEFB110Q30KQ9 67 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 Q5W150 140 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 UGT2A3Q6UWM9 527 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 LINC00173Q6ZV60 143 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 TAC4Q86UU9 113 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 NOXO1Q8NFA2 376 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 TMEM54Q969K7 222 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 FAM3DQ96BQ1 224 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 TCEANC2Q96MN5 208 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 PSKH2Q96QS6 385 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 PANX2Q96RD6 677 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 SFXN3Q9BWM7 321 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 UGT1A7Q9HAW7 530 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 UGT1A10Q9HAW8 530 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 UGT1A8Q9HAW9 530 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 NT5MQ9NPB1 228 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 FAIMQ9NVQ4 179 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms