RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 ASPHD2Q6ICH7 369 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 SSX6Q7RTT6 188 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 ANGPTL5Q86XS5 388 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 MKXQ8IYA7 352 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 OR4M1Q8NGD0 313 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 SSX3Q99909 188 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 MMP27Q9H306 513 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 OR14J1Q9UGF5 321 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 SLC7A11Q9UPY5 501 aa18.43■□□□□ 0.54
PTPN4-211ENST00000488279 A0A1W2PQL4 384 aaPredicted RBP18.42■□□□□ 0.54
PTPN4-211ENST00000488279 CCL1P22362 96 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 POLR2IP36954 125 aaKnown RBP18.42■□□□□ 0.54
PTPN4-211ENST00000488279 CEBPDP49716 269 aaPredicted RBP18.42■□□□□ 0.54
PTPN4-211ENST00000488279 ODF4Q2M2E3 257 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 CATSPERDQ86XM0 798 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 CALHM1Q8IU99 346 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 C17orf50Q8WW18 174 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 RBM4BQ9BQ04 359 aaKnown RBP18.42■□□□□ 0.54
PTPN4-211ENST00000488279 ADI1Q9BV57 179 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 PKIBQ9C010 78 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 PPA2Q9H2U2 334 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 PLEKHA1Q9HB21 404 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 HES4Q9HCC6 221 aa18.42■□□□□ 0.54
PTPN4-211ENST00000488279 FAM230AA0A1W2PPH8 454 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 METTL15A6NJ78 407 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 H3BUX3 64 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 SYT7O43581 403 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 SULT1C4O75897 302 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 TK1P04183 234 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 IL24Q13007 206 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 SLC35E4Q6ICL7 350 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 BATF2Q8N1L9 274 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 OR10H4Q8NGA5 316 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 OR8J1Q8NGP2 316 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 UBE2FQ969M7 185 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 CENPNQ96H22 339 aaPredicted RBP18.41■□□□□ 0.54
PTPN4-211ENST00000488279 MEGF9Q9H1U4 602 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 USE1Q9NZ43 259 aa18.41■□□□□ 0.54
PTPN4-211ENST00000488279 APOL3O95236 402 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 ERVK11-1P61568 191 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 TMED1Q13445 227 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 C11orf42Q8N5U0 333 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 CCDC54Q8NEL0 328 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 TRMT10AQ8TBZ6 339 aaKnown RBP18.4■□□□□ 0.54
PTPN4-211ENST00000488279 RORBQ92753 470 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 RFKQ969G6 155 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 AJUBAQ96IF1 538 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 RIBC2Q9H4K1 309 aa18.4■□□□□ 0.54
PTPN4-211ENST00000488279 SERPINA3P01011 423 aa18.39■□□□□ 0.53
PTPN4-211ENST00000488279 LGALS4P56470 323 aa18.39■□□□□ 0.53
PTPN4-211ENST00000488279 UBE2V2Q15819 145 aa18.39■□□□□ 0.53
PTPN4-211ENST00000488279 AANATQ16613 207 aa18.39■□□□□ 0.53
PTPN4-211ENST00000488279 LRRC75BQ2VPJ9 315 aa18.39■□□□□ 0.53
PTPN4-211ENST00000488279 GABARAPL3Q9BY60 117 aa18.39■□□□□ 0.53
PTPN4-211ENST00000488279 FBLN5Q9UBX5 448 aa18.39■□□□□ 0.53
PTPN4-211ENST00000488279 OAZ3Q9UMX2 235 aa18.39■□□□□ 0.53
PTPN4-211ENST00000488279 H3BSH0 61 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 K7N7A8 449 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 GATBO75879 557 aaKnown RBP18.38■□□□□ 0.53
PTPN4-211ENST00000488279 CCL3L1P16619 93 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 GABRA5P31644 462 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 FUT6P51993 359 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 ERVFRD-1P60508 538 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 LY6EQ16553 131 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 PDLIM3Q53GG5 364 aaPredicted RBP18.38■□□□□ 0.53
PTPN4-211ENST00000488279 EME1Q96AY2 570 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 OSBPL10Q9BXB5 764 aa18.38■□□□□ 0.53
PTPN4-211ENST00000488279 CIB2O75838 187 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 CHRM2P08172 466 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 COX7A1P24310 79 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 CDC42P60953 191 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 COL10A1Q03692 680 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 ZNF273Q14593 569 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 ASCC1Q8N9N2 400 aaKnown RBP18.37■□□□□ 0.53
PTPN4-211ENST00000488279 PPP1R35Q8TAP8 253 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 CEP19Q96LK0 163 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 RAB18Q9NP72 206 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 MTCH1Q9NZJ7 389 aa18.37■□□□□ 0.53
PTPN4-211ENST00000488279 PIPP12273 146 aaPredicted RBP18.36■□□□□ 0.53
PTPN4-211ENST00000488279 PAX6P26367 422 aa18.36■□□□□ 0.53
PTPN4-211ENST00000488279 FAM220AQ7Z4H9 259 aa18.36■□□□□ 0.53
PTPN4-211ENST00000488279 PRSS35Q8N3Z0 413 aa18.36■□□□□ 0.53
PTPN4-211ENST00000488279 TRUB1Q8WWH5 349 aaKnown RBP18.36■□□□□ 0.53
PTPN4-211ENST00000488279 C10orf35Q96D05 121 aa18.36■□□□□ 0.53
PTPN4-211ENST00000488279 CHST5Q9GZS9 411 aa18.36■□□□□ 0.53
PTPN4-211ENST00000488279 GNG8Q9UK08 70 aa18.36■□□□□ 0.53
PTPN4-211ENST00000488279 IGKV1-27A0A075B6S5 117 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 SAC3D1A6NKF1 404 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 C17orf98A8MV24 154 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 F8VVB4 439 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 F8VWA3 439 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 UBCP0CG48 685 aaKnown RBP18.35■□□□□ 0.53
PTPN4-211ENST00000488279 KIR2DS4P43632 304 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 BMXP51813 675 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 ZNF782Q6ZMW2 699 aaPredicted RBP18.35■□□□□ 0.53
PTPN4-211ENST00000488279 GDPD3Q7L5L3 318 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 EGFL6Q8IUX8 553 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 OR4C13Q8NGP0 309 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 SLAMF9Q96A28 289 aa18.35■□□□□ 0.53
PTPN4-211ENST00000488279 BORCS8Q96FH0 119 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms