RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	YPEL2	Q96QA6	119 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	SLC22A12	Q96S37	553 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	NKX3-1	Q99801	234 aa	Predicted RBP	4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	RARRES2	Q99969	163 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ALG12	Q9BV10	488 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ELL3	Q9HB65	397 aa	Predicted RBP	4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	WFDC1	Q9HC57	220 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	FKBP11	Q9NYL4	201 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	WSB2	Q9NYS7	404 aa	Predicted RBP	4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	FOXJ2	Q9P0K8	574 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CD84	Q9UIB8	345 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	RAB22A	Q9UL26	194 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	NSG2	Q9Y328	171 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	WSB1	Q9Y6I7	421 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	COLEC10	Q9Y6Z7	277 aa		4.16	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	LOC105371242	A0A075B767	164 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	TRAV1-1	A0A0B4J248	108 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CLEC18A	A5D8T8	446 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131		A6NIZ1	184 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CCL25	O15444	150 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	PQBP1	O60828	265 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	C1QL1	O75973	258 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	SYNGR4	O95473	234 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	PRH1	P02810	166 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	TYMS	P04818	313 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	IFNA6	P05013	189 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	NGFR	P08138	427 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	LAMP2	P13473	410 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ALOX5AP	P20292	161 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	SERPINA2	P20848	420 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CHRNB4	P30926	498 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ELL	P55199	621 aa	Predicted RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	UBE2N	P61088	152 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	MRPS6	P82932	125 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	QRFP	P83859	136 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ZFP36L1	Q07352	338 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	PMS2P11	Q13670	270 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	SLC9A3R2	Q15599	337 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	TAF9	Q16594	264 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ATP6V1F	Q16864	119 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	HYAL4	Q2M3T9	481 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	TRMT12	Q53H54	448 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	WDR38	Q5JTN6	314 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ACTL10	Q5JWF8	245 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	MRPL2	Q5T653	305 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	FAM90A2P	Q658T7	463 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ETFRF1	Q6IPR1	90 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	SLC48A1	Q6P1K1	146 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	DPPA3	Q6W0C5	159 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ZNF793	Q6ZN11	406 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ZNF550	Q7Z398	422 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	GRINA	Q7Z429	371 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	LINC01551	Q86U37	167 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	SGPP2	Q8IWX5	399 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	FAM185A	Q8N0U4	392 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	D2HGDH	Q8N465	521 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CLEC18C	Q8NCF0	446 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	OR6K6	Q8NGW6	343 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	FAM213B	Q8TBF2	198 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ZPLD1	Q8TCW7	415 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ADAMTS15	Q8TE58	950 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	TSEN15	Q8WW01	171 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CORO2A	Q92828	525 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	SLC35E1	Q96K37	410 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ZNF681	Q96N22	645 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	HIST1H2AA	Q96QV6	131 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	NMNAT3	Q96T66	252 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	PARP12	Q9H0J9	701 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	RBKS	Q9H477	322 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	METTL8	Q9H825	291 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	B3GAT1	Q9P2W7	334 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	GRHPR	Q9UBQ7	328 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CKLF	Q9UBR5	152 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	CLDN16	Q9Y5I7	305 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	IER3IP1	Q9Y5U9	82 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	MRPS18B	Q9Y676	258 aa	Known RBP	4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	TMEM14A	Q9Y6G1	99 aa		4.15	□□□□□ -1.74
CDC42BPA-213	ENST00000488131	SCN5A	Q14524	2016 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	ADAMTS20	P59510	1910 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	LOC102723971	A0A1B0GUV8	181 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131		A0A1B0GVT2	93 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131		A0A1B0GWA3	101 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	SLC38A8	A6NNN8	435 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	TMEM238	C9JI98	176 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	COCH	O43405	550 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	CTSV	O60911	334 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	MMP23A	O75900	390 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	GJB5	O95377	273 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	PFN1	P07737	140 aa	Known RBP	4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	MMP7	P09237	267 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	GRPR	P30550	384 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	APOBEC3A	P31941	199 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	CCKBR	P32239	447 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	GALNS	P34059	522 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	SSR2	P43308	183 aa		4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	SNRPD1	P62314	119 aa	Known RBP	4.15	□□□□□ -1.75
CDC42BPA-213	ENST00000488131	HIST1H3A	P68431	136 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms