RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 HES4Q9HCC6 221 aa9.9□□□□□ -0.82
VPS16-208ENST00000487461 H2AFY2Q9P0M6 372 aaPredicted RBP9.9□□□□□ -0.82
VPS16-208ENST00000487461 FOXJ3Q9UPW0 622 aa9.9□□□□□ -0.82
VPS16-208ENST00000487461 SLC22A13Q9Y226 551 aa9.9□□□□□ -0.82
VPS16-208ENST00000487461 R4GMQ9 66 aa9.9□□□□□ -0.82
VPS16-208ENST00000487461 PRKDCP78527 4128 aaKnown RBP9.9□□□□□ -0.83
VPS16-208ENST00000487461 A0A0G2JK05 382 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 A0A1W2PPH5 198 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 FAM90A8PA6NJQ4 464 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 ZNF670-ZNF695F2Z2N8 137 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 TK1P04183 234 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 COX7A1P24310 79 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 MPZP25189 248 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 BMXP51813 675 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 DLX6P56179 175 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 ACTR3P61158 418 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 ERVK11-1P61568 191 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 BCL2L15Q5TBC7 163 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 SLX4IPQ5VYV7 408 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 NXNL2Q5VZ03 156 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 Q6ZTK2 550 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 LHFPL4Q7Z7J7 247 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 CALHM1Q8IU99 346 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 DYNAPQ8N1N2 210 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 C11orf44Q8N8P7 122 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 TMEM163Q8TC26 289 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 MNTQ99583 582 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 CLN6Q9NWW5 311 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 USE1Q9NZ43 259 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 OR14J1Q9UGF5 321 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 POLDIP2Q9Y2S7 368 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 SNX5Q9Y5X3 404 aa9.89□□□□□ -0.83
VPS16-208ENST00000487461 ZAR1LA6NP61 321 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 C17orf98A8MV24 154 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 F8VVB4 439 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 F8VWA3 439 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 K7N7A8 449 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 CHST1O43916 411 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 DNAJC8O75937 253 aaPredicted RBP9.88□□□□□ -0.83
VPS16-208ENST00000487461 RPP14O95059 124 aaKnown RBP9.88□□□□□ -0.83
VPS16-208ENST00000487461 PIPP12273 146 aaPredicted RBP9.88□□□□□ -0.83
VPS16-208ENST00000487461 RAB13P51153 203 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 LGALS4P56470 323 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 COL10A1Q03692 680 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 C12orf73Q69YU5 71 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 ZNF782Q6ZMW2 699 aaPredicted RBP9.88□□□□□ -0.83
VPS16-208ENST00000487461 SSX6Q7RTT6 188 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 OR4C13Q8NGP0 309 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 TRMT10AQ8TBZ6 339 aaKnown RBP9.88□□□□□ -0.83
VPS16-208ENST00000487461 CFHR4Q92496 578 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 IL4I1Q96RQ9 567 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 CADM1Q9BY67 442 aaKnown RBP9.88□□□□□ -0.83
VPS16-208ENST00000487461 MOB1AQ9H8S9 216 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 KRT84Q9NSB2 600 aa9.88□□□□□ -0.83
VPS16-208ENST00000487461 IGKV1-27A0A075B6S5 117 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 hCG_1809904A0A1W2PP81 198 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 A0A1W2PPE2 198 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 FAM230AA0A1W2PPH8 454 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 A0A1W2PR64 198 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 A0A1W2PRV1 198 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 MEX3AA1L020 520 aaKnown RBP9.87□□□□□ -0.83
VPS16-208ENST00000487461 G3V2T6 193 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 G3V4G9 280 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 H3BSH0 61 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 CCL1P22362 96 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 IL24Q13007 206 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 UBE2V2Q15819 145 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 ODF4Q2M2E3 257 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 LDLRAD2Q5SZI1 272 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 KDM4DQ6B0I6 523 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 C11orf88Q6PI97 169 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 CCBE1Q6UXH8 406 aaPredicted RBP9.87□□□□□ -0.83
VPS16-208ENST00000487461 CCDC121Q6ZUS5 278 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 KLHDC1Q8N7A1 406 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 YIPF7Q8N8F6 280 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 OR2T6Q8NHC8 308 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 TBX5Q99593 518 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 PRRG3Q9BZD7 231 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 PKIBQ9C010 78 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 RANBP3Q9H6Z4 567 aaPredicted RBP9.87□□□□□ -0.83
VPS16-208ENST00000487461 RAB18Q9NP72 206 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 MTCH1Q9NZJ7 389 aa9.87□□□□□ -0.83
VPS16-208ENST00000487461 TET2Q6N021 2002 aaPredicted RBP9.87□□□□□ -0.83
VPS16-208ENST00000487461 A0A1W2PQL4 384 aaPredicted RBP9.86□□□□□ -0.83
VPS16-208ENST00000487461 DHRS7CA6NNS2 312 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 VGLL3A8MV65 326 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 ZNF737O75373 536 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 INMTO95050 263 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 OPN1MWP04001 364 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 ARG1P05089 322 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 CHRM2P08172 466 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 OPN1MW2P0DN77 364 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 OPN1MW3P0DN78 364 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 VSIG10L2P0DP72 767 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 POLR2IP36954 125 aaKnown RBP9.86□□□□□ -0.83
VPS16-208ENST00000487461 ATP6AP1Q15904 470 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 PLA1AQ53H76 456 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 LIAT1Q6ZQX7 453 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 CATSPERDQ86XM0 798 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 NKX3-1Q99801 234 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms