RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
NEK4-204ENST00000487068 ONECUT1Q9UBC0 465 aa8.49□□□□□ -1.05
NEK4-204ENST00000487068 SLC25A10Q9UBX3 287 aaPredicted RBP8.49□□□□□ -1.05
NEK4-204ENST00000487068 POLR3KQ9Y2Y1 108 aaPredicted RBP8.49□□□□□ -1.05
NEK4-204ENST00000487068 KIAA2026Q5HYC2 2103 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 SLC1A7O00341 560 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 MAGEB3O15480 346 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 ZFPL1O95159 310 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 ATP6V1G2O95670 118 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 RPSAP08865 295 aaKnown RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 PGA5P0DJD9 388 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 PIPP12273 146 aaPredicted RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 ATF1P18846 271 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 PRKACBP22694 351 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 SOX2P48431 317 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 TGM4P49221 684 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 CEBPDP49716 269 aaPredicted RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 SNU13P55769 128 aaKnown RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 MTCP1P56278 107 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 FGF12P61328 243 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 SRSF2Q01130 221 aaKnown RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 IL24Q13007 206 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 CDK5R1Q15078 307 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 RPL22L1Q6P5R6 122 aaKnown RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 FIP1L1Q6UN15 594 aaKnown RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 ZNF841Q6ZN19 808 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 ACP7Q6ZNF0 438 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 C1orf229Q6ZS94 237 aaPredicted RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 Q6ZSR3 168 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 LHFPL2Q6ZUX7 228 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 KRT74Q7RTS7 529 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 FGFRL1Q8N441 504 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 ZFP41Q8N8Y5 198 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 OR5D18Q8NGL1 313 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 GATAD2BQ8WXI9 593 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 TFAP2CQ92754 450 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 GGHQ92820 318 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 EMG1Q92979 244 aaKnown RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 SPSB1Q96BD6 273 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 CEP19Q96LK0 163 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 GAFA1Q96PS6 74 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 SPACA5Q96QH8 159 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 SLC6A7Q99884 636 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 JAM3Q9BX67 310 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 PKIBQ9C010 78 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 MS4A7Q9GZW8 240 aaPredicted RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 DNTTIP1Q9H147 329 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 SCN3BQ9NY72 215 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 RASL12Q9NYN1 266 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 CNOT2Q9NZN8 540 aaKnown RBP8.48□□□□□ -1.05
NEK4-204ENST00000487068 KAAG1Q9UBP8 84 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 CLEC2DQ9UHP7 191 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
NEK4-204ENST00000487068 RFPL4AA6NLU0 287 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 RFPL4AL1F8VTS6 287 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 SPRY1O43609 319 aaPredicted RBP8.47□□□□□ -1.05
NEK4-204ENST00000487068 SULT1B1O43704 296 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 TOX4O94842 621 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 ECDO95905 644 aaPredicted RBP8.47□□□□□ -1.05
NEK4-204ENST00000487068 PSG2P11465 335 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 FPR2P25090 351 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 HSPA13P48723 471 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 KRTAP24-1Q3LI83 254 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 CCDC58Q4VC31 144 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 GPR157Q5UAW9 335 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 XAF1Q6GPH4 301 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 RBMS3Q6XE24 437 aaKnown RBP8.47□□□□□ -1.05
NEK4-204ENST00000487068 ZNF788Q6ZQV5 615 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 UTS2BQ765I0 119 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 SERPINA12Q8IW75 414 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 MKXQ8IYA7 352 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 CMTM4Q8IZR5 234 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 ASCC1Q8N9N2 400 aaKnown RBP8.47□□□□□ -1.05
NEK4-204ENST00000487068 ZNRF1Q8ND25 227 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 OR5D14Q8NGL3 314 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 OR52N1Q8NH53 320 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 ANGPTL6Q8NI99 470 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 GPR148Q8TDV2 347 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 RNF166Q96A37 237 aaPredicted RBP8.47□□□□□ -1.05
NEK4-204ENST00000487068 SMIM19Q96E16 107 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 CPNE2Q96FN4 548 aaPredicted RBP8.47□□□□□ -1.05
NEK4-204ENST00000487068 GPER1Q99527 375 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 ZNF649Q9BS31 505 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 SUCNR1Q9BXA5 334 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 FAM192AQ9GZU8 254 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 ZCCHC4Q9H5U6 513 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 ELL3Q9HB65 397 aaPredicted RBP8.47□□□□□ -1.05
NEK4-204ENST00000487068 OPN4Q9UHM6 478 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 PSORS1C1Q9UIG5 152 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 NUP50Q9UKX7 468 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 ERGIC3Q9Y282 383 aa8.47□□□□□ -1.05
NEK4-204ENST00000487068 IGKV1D-17A0A075B6S4 117 aa8.46□□□□□ -1.06
NEK4-204ENST00000487068 IGKV1-27A0A075B6S5 117 aa8.46□□□□□ -1.06
NEK4-204ENST00000487068 KIR2DS1A0A191URI9 304 aa8.46□□□□□ -1.06
NEK4-204ENST00000487068 ZNF879B4DU55 563 aa8.46□□□□□ -1.06
NEK4-204ENST00000487068 PTGES3LE9PB15 166 aa8.46□□□□□ -1.06
NEK4-204ENST00000487068 H0YJX3 145 aa8.46□□□□□ -1.06
NEK4-204ENST00000487068 SIGLEC5O15389 551 aa8.46□□□□□ -1.06
NEK4-204ENST00000487068 LIPFP07098 398 aa8.46□□□□□ -1.06
NEK4-204ENST00000487068 SFTPBP07988 381 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms