RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 M0R1W7 72 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 HKR1P10072 659 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 MPZP25189 248 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 CFPP27918 469 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 POU3F4P49335 361 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 CEBPDP49716 269 aaPredicted RBP10.61□□□□□ -0.71
CHMP3-208ENST00000486404 FUT6P51993 359 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 RAB40BQ12829 278 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 ANGPTL5Q86XS5 388 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 CALHM1Q8IU99 346 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 RDH10Q8IZV5 341 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 ZNF561Q8N587 486 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 ASCC1Q8N9N2 400 aaKnown RBP10.61□□□□□ -0.71
CHMP3-208ENST00000486404 SLAMF9Q96A28 289 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 CEP19Q96LK0 163 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 RDH12Q96NR8 316 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 METTL8Q9H825 291 aaKnown RBP10.61□□□□□ -0.71
CHMP3-208ENST00000486404 INPP5EQ9NRR6 644 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 FAM118AQ9NWS6 357 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 HHLA2Q9UM44 414 aa10.61□□□□□ -0.71
CHMP3-208ENST00000486404 EXOGQ9Y2C4 368 aaKnown RBP10.61□□□□□ -0.71
CHMP3-208ENST00000486404 RPL36Q9Y3U8 105 aaKnown RBP10.61□□□□□ -0.71
CHMP3-208ENST00000486404 A0A0U1RQK1 487 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 BTBD17A6NE02 478 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 E9PQ18 207 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 H0YAE9 185 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 J3QRE1 110 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 NOS1APO75052 506 aaPredicted RBP10.6□□□□□ -0.71
CHMP3-208ENST00000486404 INMTO95050 263 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 PAHP00439 452 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 KNG1P01042 644 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 CRYBA1P05813 215 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 MELTFP08582 738 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 GABRB1P18505 474 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 PRDX2P32119 198 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 CCR9P51686 369 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 ATP1B3P54709 279 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 MRPL28Q13084 256 aaKnown RBP10.6□□□□□ -0.71
CHMP3-208ENST00000486404 GALEQ14376 348 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 UBE2V2Q15819 145 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 SLC25A26Q70HW3 274 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 Q8IYB0 196 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 SYS1Q8N2H4 156 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 CD177Q8N6Q3 437 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 TSEN15Q8WW01 171 aaKnown RBP10.6□□□□□ -0.71
CHMP3-208ENST00000486404 SSMEM1Q8WWF3 244 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 CYGBQ8WWM9 190 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 EMG1Q92979 244 aaKnown RBP10.6□□□□□ -0.71
CHMP3-208ENST00000486404 PELI1Q96FA3 418 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 COMMD4Q9H0A8 199 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 NEK6Q9HC98 313 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 AMBNQ9NP70 447 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 MAB21L2Q9Y586 359 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 DSCAML1Q8TD84 2053 aa10.6□□□□□ -0.71
CHMP3-208ENST00000486404 A0A1W2PRD5 423 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 A0A1W2PRF3 423 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 A0A1W2PRM7 423 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 NPFFO15130 113 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 IGHA1P01876 353 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 ISG15P05161 165 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 FBP1P09467 338 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 CCDC159P0C7I6 412 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 PRKACBP22694 351 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 AZGP1P25311 298 aaKnown RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 RBP2P50120 134 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 GBX2P52951 348 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 MTCP1P56278 107 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 NANOS3P60323 173 aaKnown RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 RPL31P62899 125 aaKnown RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 KLRD1Q13241 179 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 ALKBH1Q13686 389 aaKnown RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 RCN1Q15293 331 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 LRRC36Q1X8D7 754 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 KLHL22Q53GT1 634 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 C16orf87Q6PH81 154 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 METAP1DQ6UB28 335 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 Q6YL49 198 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 LHFPL2Q6ZUX7 228 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 LHFPL3Q86UP9 236 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 TMEM86BQ8N661 226 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 OR5D13Q8NGL4 314 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 RHOXF1Q8NHV9 184 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 TBC1D15Q8TC07 691 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 SPSB1Q96BD6 273 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 FGGYQ96C11 551 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 ADAT3Q96EY9 351 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 OPALINQ96PE5 141 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 HES4Q9HCC6 221 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 C8orf4Q9NR00 106 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 C19orf12Q9NSK7 152 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 ERVK13-1Q9NX77 482 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 FRRS1LQ9P0K9 344 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-208ENST00000486404 MYRFQ9Y2G1 1151 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 POMT1Q9Y6A1 747 aa10.59□□□□□ -0.71
CHMP3-208ENST00000486404 IGKV1-27A0A075B6S5 117 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 hCG_1809904A0A1W2PP81 198 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 A0A1W2PPE2 198 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms