RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ZCCHC4Q9H5U6 513 aa6.35□□□□□ -1.39
XRN1-212ENST00000486211 N6AMT1Q9Y5N5 214 aa6.35□□□□□ -1.39
XRN1-212ENST00000486211 MPC1Q9Y5U8 109 aa6.35□□□□□ -1.39
XRN1-212ENST00000486211 HSPG2P98160 4391 aa6.35□□□□□ -1.39
XRN1-212ENST00000486211 DNAH2Q9P225 4427 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 TLDC2A0PJX2 215 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 TRPC5OSA6NMA1 111 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 ZNF850A8MQ14 1090 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 LY6LH3BQJ8 138 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 UBDO15205 165 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 BIRC5O15392 142 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 FGF16O43320 207 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 DNAJC8O75937 253 aaPredicted RBP6.34□□□□□ -1.39
XRN1-212ENST00000486211 BRI3O95415 125 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 IGLV1-47P01700 117 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 ACKR3P25106 362 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 MRPL19P49406 292 aaKnown RBP6.34□□□□□ -1.39
XRN1-212ENST00000486211 SLC7A2P52569 658 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 GNB1P62873 340 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 RUNX1Q01196 453 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 GABPB1Q06547 395 aaPredicted RBP6.34□□□□□ -1.39
XRN1-212ENST00000486211 ZNF616Q08AN1 781 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 ST3GAL3Q11203 375 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 KIAA0141Q14154 515 aaPredicted RBP6.34□□□□□ -1.39
XRN1-212ENST00000486211 CYP51A1Q16850 503 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 NANOGP8Q6NSW7 305 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 ACSM6Q6P461 480 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 KCTD8Q6ZWB6 473 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 ZBTB46Q86UZ6 589 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 FOXRED2Q8IWF2 684 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 ZNF676Q8N7Q3 588 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 CSNK2A3Q8NEV1 391 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 SLC26A7Q8TE54 656 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 UBLCP1Q8WVY7 318 aaPredicted RBP6.34□□□□□ -1.39
XRN1-212ENST00000486211 RASSF5Q8WWW0 418 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 AQP3Q92482 292 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 RNF170Q96K19 258 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 OR52B2Q96RD2 323 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 GNB4Q9HAV0 340 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 RASL12Q9NYN1 266 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 ZNF319Q9P2F9 582 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 LGALS13Q9UHV8 139 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 SIGLEC7Q9Y286 467 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 IER3IP1Q9Y5U9 82 aa6.34□□□□□ -1.39
XRN1-212ENST00000486211 A0A087WUU8 490 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 OR6C68A6NDL8 312 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 NUPR2A6NF83 97 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 LEUTXA8MZ59 168 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 C12orf77C9JDV5 145 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 K7N7A8 449 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 AP4M1O00189 453 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 HSPA12AO43301 675 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 TBX1O43435 398 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 ZNF737O75373 536 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 NDUFB2O95178 105 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 CST4P01036 141 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 IGHG4P01861 327 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 FAM106CPP0CH98 169 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 ARSBP15848 533 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 PSMB8P28062 276 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 GPM6AP51674 278 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 ARHGDIBP52566 201 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 MTPNP58546 118 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 ESRRGP62508 458 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 TIGD6Q17RP2 521 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 WHAMMP3Q1A5X7 153 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 SMIM21Q3B7S5 101 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 TPTE2P1Q5T6R2 138 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 LGALS9CQ6DKI2 356 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 TMEM65Q6PI78 240 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 TBPL2Q6SJ96 375 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 LINC00322Q6ZN03 302 aaPredicted RBP6.33□□□□□ -1.4
XRN1-212ENST00000486211 ZBTB49Q6ZSB9 765 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 HAPLN4Q86UW8 402 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 THNSL2Q86YJ6 484 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 LINC00471Q8N535 108 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 POC1AQ8NBT0 407 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 DLX4Q92988 240 aaPredicted RBP6.33□□□□□ -1.4
XRN1-212ENST00000486211 EME1Q96AY2 570 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 SPDL1Q96EA4 605 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 PRRC1Q96M27 445 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 ZNF488Q96MN9 340 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 KCNJ15Q99712 375 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 COPS4Q9BT78 406 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 KAT8Q9H7Z6 458 aaKnown RBP6.33□□□□□ -1.4
XRN1-212ENST00000486211 ABCB9Q9NP78 766 aa6.33□□□□□ -1.4
XRN1-212ENST00000486211 NOTOA8MTQ0 251 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 FFAR1O14842 300 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 TROVE2P10155 538 aaKnown RBP eCLIP6.32□□□□□ -1.4
XRN1-212ENST00000486211 KIR3DL2P43630 455 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 GPR12P47775 334 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 GZMMP51124 257 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 SLC18A1P54219 525 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 MEF2CQ06413 473 aaPredicted RBP6.32□□□□□ -1.4
XRN1-212ENST00000486211 STX3Q13277 289 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 PMS2P11Q13670 270 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 FAM53AQ6NSI3 398 aaPredicted RBP6.32□□□□□ -1.4
XRN1-212ENST00000486211 CEMP1Q6PRD7 247 aaPredicted RBP6.32□□□□□ -1.4
XRN1-212ENST00000486211 DPY19L2P2Q6ZN68 376 aa6.32□□□□□ -1.4
XRN1-212ENST00000486211 MBOAT2Q6ZWT7 520 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms