RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 C9orf16Q9BUW7 83 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 CHST5Q9GZS9 411 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 S100A14Q9HCY8 104 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 EXOGQ9Y2C4 368 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 GMPPBQ9Y5P6 360 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 NBEAL1Q6ZS30 2694 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 A0A1B0GUS0 222 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 NPFFO15130 113 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 IGHV4-59P01825 116 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 FBP1P09467 338 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 KIR3DL2P43630 455 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 RPL15P61313 204 aaKnown RBP15.08■□□□□ 0
PRPF40A-209ENST00000486100 TMEM244Q5VVB8 128 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 FDX2Q6P4F2 183 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 FAM185AQ8N0U4 392 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 OR2G2Q8NGZ5 317 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 DYRK2Q92630 601 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 MBOAT4Q96T53 435 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 DPAGT1Q9H3H5 408 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 C1RLQ9NZP8 487 aa15.08■□□□□ 0
PRPF40A-209ENST00000486100 LOC107986453A0A1B0GWG9 222 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 A0A1W2PRD5 423 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 A0A1W2PRF3 423 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 A0A1W2PRM7 423 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 H0YAE9 185 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 SLC16A6O15403 523 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 RRP9O43818 475 aaKnown RBP15.07■□□□□ 0
PRPF40A-209ENST00000486100 KNG1P01042 644 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 GABRB1P18505 474 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 OR12D2P58182 307 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 KLRD1Q13241 179 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 BATF2Q8N1L9 274 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 ACBD7Q8N6N7 88 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 OR5D13Q8NGL4 314 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 OR4F5Q8NH21 305 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 PP6455Q8WZ26 134 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 SLC29A1Q99808 456 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 SLITRK2Q9H156 845 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 BEX1Q9HBH7 125 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 C19orf12Q9NSK7 152 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 MTCH1Q9NZJ7 389 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 FRRS1LQ9P0K9 344 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 AASSQ9UDR5 926 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 OR14J1Q9UGF5 321 aa15.07■□□□□ 0
PRPF40A-209ENST00000486100 IGKV1-27A0A075B6S5 117 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 A0A1W2PPH5 198 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 MPZL2O60487 215 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 NDUFA7O95182 113 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 ISG15P05161 165 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 CEBPDP49716 269 aaPredicted RBP15.06■□□□□ 0
PRPF40A-209ENST00000486100 CCR9P51686 369 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 RAG2P55895 527 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 RPL31P62899 125 aaKnown RBP15.06■□□□□ 0
PRPF40A-209ENST00000486100 RELBQ01201 579 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 ACSM1Q08AH1 577 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 TMEM200BQ69YZ2 307 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 ZBTB49Q6ZSB9 765 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 ENTHD1Q8IYW4 607 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 RHOXF1Q8NHV9 184 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 LGALS12Q96DT0 336 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 BORCS8Q96FH0 119 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 FAM234AQ9H0X4 552 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 ZNRD1Q9P1U0 126 aa15.06■□□□□ 0
PRPF40A-209ENST00000486100 SF3B6Q9Y3B4 125 aaKnown RBP15.06■□□□□ 0
PRPF40A-209ENST00000486100 MEIOCA2RUB1 952 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 SPRY1O43609 319 aaPredicted RBP15.05■□□□□ -0
PRPF40A-209ENST00000486100 GPR137BO60478 399 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 TK1P04183 234 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 HTR1AP08908 422 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 NANOS3P60323 173 aaKnown RBP15.05■□□□□ -0
PRPF40A-209ENST00000486100 CNN3Q15417 329 aaKnown RBP15.05■□□□□ -0
PRPF40A-209ENST00000486100 HCP5Q6MZN7 132 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 EGFL6Q8IUX8 553 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 PQLC1Q8N2U9 271 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 PNKDQ8N490 385 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 DNAAF1Q8NEP3 725 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 OR4M1Q8NGD0 313 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 ADAT3Q96EY9 351 aaPredicted RBP15.05■□□□□ -0
PRPF40A-209ENST00000486100 MRPL48Q96GC5 212 aaKnown RBP15.05■□□□□ -0
PRPF40A-209ENST00000486100 CEP19Q96LK0 163 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 Q96MT0 163 aa15.05■□□□□ -0
PRPF40A-209ENST00000486100 MYCBPQ99417 103 aaPredicted RBP15.05■□□□□ -0
PRPF40A-209ENST00000486100 LOC100130705A0A1B0GUX0 176 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 F8VVB4 439 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 F8VWA3 439 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 J3QLW9 94 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 K7N7A8 449 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 PAHP00439 452 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 CHRM2P08172 466 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 ZNF19P17023 458 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 SAA4P35542 130 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 RBP2P50120 134 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 ATP1B3P54709 279 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 ACTA2P62736 377 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 ACTG2P63267 376 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 SLC25A26Q70HW3 274 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 UTS2BQ765I0 119 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 C11orf42Q8N5U0 333 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 SLAMF9Q96A28 289 aa15.04■□□□□ -0
PRPF40A-209ENST00000486100 FGGYQ96C11 551 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms