RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TMEM89A2RUT3 159 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 OR4C45A6NMZ5 311 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 E9PI62 339 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 HOXA3O43365 443 aaPredicted RBP10.1□□□□□ -0.79
MSH5-216ENST00000484309 FADS2O95864 444 aaKnown RBP10.1□□□□□ -0.79
MSH5-216ENST00000484309 SERPINA3P01011 423 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 IGHV1-69P01742 117 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 IGHA1P01876 353 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 MPZP25189 248 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 POU3F4P49335 361 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 FUT6P51993 359 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 ALKBH1Q13686 389 aaKnown RBP10.1□□□□□ -0.79
MSH5-216ENST00000484309 GALEQ14376 348 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 PDCD1Q15116 288 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 CNN3Q15417 329 aaKnown RBP10.1□□□□□ -0.79
MSH5-216ENST00000484309 FDX2Q6P4F2 183 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 SLC25A26Q70HW3 274 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 CMTM4Q8IZR5 234 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 PNKDQ8N490 385 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 Q8N7P7 452 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 ZNF676Q8N7Q3 588 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 OR13C3Q8NGS6 347 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 C8orf46Q8TAG6 207 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 GATAD2BQ8WXI9 593 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 RFT1Q96AA3 541 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 SDSLQ96GA7 329 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 ZNF649Q9BS31 505 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 PKIBQ9C010 78 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 C19orf12Q9NSK7 152 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 MTCH1Q9NZJ7 389 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 RPL36Q9Y3U8 105 aaKnown RBP10.1□□□□□ -0.79
MSH5-216ENST00000484309 KPTNQ9Y664 436 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 KIAA2026Q5HYC2 2103 aa10.1□□□□□ -0.79
MSH5-216ENST00000484309 IGKV1-9A0A0C4DH69 117 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 A0A0U1RQK1 487 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 SLC1A7O00341 560 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 GPR37O15354 613 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 NOS1APO75052 506 aaPredicted RBP10.09□□□□□ -0.79
MSH5-216ENST00000484309 CALCBP10092 127 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 AZGP1P25311 298 aaKnown RBP10.09□□□□□ -0.79
MSH5-216ENST00000484309 PRDX2P32119 198 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 CCR9P51686 369 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 SNU13P55769 128 aaKnown RBP10.09□□□□□ -0.79
MSH5-216ENST00000484309 CAV3P56539 151 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 RAB40BQ12829 278 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 IL24Q13007 206 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 C11orf91Q3C1V1 193 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 ZNF691Q5VV52 312 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 RNF144BQ7Z419 303 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 CCDC54Q8NEL0 328 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 OR4M1Q8NGD0 313 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 OR13C9Q8NGT0 318 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 PP6455Q8WZ26 134 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 SLC25A28Q96A46 364 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 MRPL48Q96GC5 212 aaKnown RBP10.09□□□□□ -0.79
MSH5-216ENST00000484309 CEP19Q96LK0 163 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 RDH12Q96NR8 316 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 SPACA5Q96QH8 159 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 IL36RNQ9UBH0 155 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 HHLA2Q9UM44 414 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 FBN3Q75N90 2809 aa10.09□□□□□ -0.79
MSH5-216ENST00000484309 MEX3AA1L020 520 aaKnown RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 RNASEK-C17orf49H0YIS7 233 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 SPRY1O43609 319 aaPredicted RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 ISG15P05161 165 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 RNASE1P07998 156 aaKnown RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 MELTFP08582 738 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 OCM2P0CE71 109 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 OCMP0CE72 109 aaPredicted RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 LIMS3P0CW19 117 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 LIMS4P0CW20 117 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 PIPP12273 146 aaPredicted RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 ATF1P18846 271 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 CFPP27918 469 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 GTF2A1P52655 376 aaPredicted RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 ATP1B3P54709 279 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 ERVK11-1P61568 191 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 COL10A1Q03692 680 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 KLHL22Q53GT1 634 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 AWAT1Q58HT5 328 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 SYS1Q8N2H4 156 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 KIR3DL3Q8N743 410 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 ASCC1Q8N9N2 400 aaKnown RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 OR5D18Q8NGL1 313 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 EMG1Q92979 244 aaKnown RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 C10orf35Q96D05 121 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 PDCD1LG2Q9BQ51 273 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 ZMAT3Q9HA38 289 aaKnown RBP10.08□□□□□ -0.8
MSH5-216ENST00000484309 INPP5EQ9NRR6 644 aa10.08□□□□□ -0.8
MSH5-216ENST00000484309 H0YAE9 185 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 ANGPTL7O43827 346 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 ZFPL1O95159 310 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 HKR1P10072 659 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 BCL3P20749 454 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 OMGP23515 440 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 NPBWR2P48146 333 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 RBP2P50120 134 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 ETV1P50549 477 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 GBX2P52951 348 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms