RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
COL9A2-207ENST00000482722 LILRA5A6NI73 299 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 DXOO77932 396 aaKnown RBP12.55□□□□□ -0.4
COL9A2-207ENST00000482722 SERPINA2P20848 420 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 LMO1P25800 156 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 FBXW4P57775 412 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 PKIAP61925 76 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 CSNK2A1P68400 391 aaPredicted RBP12.55□□□□□ -0.4
COL9A2-207ENST00000482722 GRINAQ7Z429 371 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 CSNK2A3Q8NEV1 391 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 NPRL2Q8WTW4 380 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 MRPL24Q96A35 216 aaKnown RBP12.55□□□□□ -0.4
COL9A2-207ENST00000482722 C1orf123Q9NWV4 160 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 HS3ST3B1Q9Y662 390 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 PPP1R2P9O14990 202 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 ELOBQ15370 118 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 LPAL2Q16609 132 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 RNASE11Q8TAA1 199 aaKnown RBP12.54□□□□□ -0.4
COL9A2-207ENST00000482722 MISP3Q96FF7 219 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 PBOV1Q9GZY1 135 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 FBLN5Q9UBX5 448 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 SRPK3Q9UPE1 567 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 MRPS28Q9Y2Q9 187 aaKnown RBP12.54□□□□□ -0.4
COL9A2-207ENST00000482722 TECTAO75443 2155 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 IGHV1OR21-1A0A087WYE8 117 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 TGIF2-C20orf24A0A0A6YYL0 155 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF587BE7ETH6 402 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 K7ESF4 209 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 CDC14BO60729 498 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 CRTAPO75718 401 aaPredicted RBP12.54□□□□□ -0.4
COL9A2-207ENST00000482722 GIMD1P0DJR0 217 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 HSD11B2P80365 405 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 GGNBP1Q5YKI7 109 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 OR5D14Q8NGL3 314 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 OR1N1Q8NGS0 311 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 EMG1Q92979 244 aaKnown RBP12.54□□□□□ -0.4
COL9A2-207ENST00000482722 RAB39BQ96DA2 213 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 SLAMF6Q96DU3 332 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 FAM71F1Q96KD3 344 aaPredicted RBP12.54□□□□□ -0.4
COL9A2-207ENST00000482722 C1orf147Q96MC9 270 aaPredicted RBP12.54□□□□□ -0.4
COL9A2-207ENST00000482722 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 SUSD2Q9UGT4 822 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 TUBD1Q9UJT1 453 aa12.54□□□□□ -0.4
COL9A2-207ENST00000482722 DMXL1Q9Y485 3027 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 H3BQ15 152 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 TAGLN2P37802 199 aaKnown RBP12.53□□□□□ -0.4
COL9A2-207ENST00000482722 CEBPGP53567 150 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 SNU13P55769 128 aaKnown RBP12.53□□□□□ -0.4
COL9A2-207ENST00000482722 ERVFRD-1P60508 538 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 TLE3Q04726 772 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 MYO7BQ6PIF6 2116 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 BEND4Q6ZU67 534 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 NUP54Q7Z3B4 507 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 SPEM1Q8N4L4 309 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 FAM213BQ8TBF2 198 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 RHBDD1Q8TEB9 315 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 GUCD1Q96NT3 240 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 SUCNR1Q9BXA5 334 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 NELFAQ9H3P2 528 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 FAM206AQ9NX38 181 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 RCL1Q9Y2P8 373 aaKnown RBP12.53□□□□□ -0.4
COL9A2-207ENST00000482722 BORCS7-ASMTA0A0B4J1R7 106 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 PATE3B3GLJ2 98 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 TSTD3H0UI37 97 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 NPIPB7O75200 414 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 TRGC2P03986 189 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 FABP4P15090 132 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 KLK2P20151 261 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 DCAF7P61962 342 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 FOXK1P85037 733 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 UBE2V2Q15819 145 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 MAFAQ8NHW3 353 aaPredicted RBP12.53□□□□□ -0.4
COL9A2-207ENST00000482722 GPER1Q99527 375 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 PLEKHA2Q9HB19 425 aa12.53□□□□□ -0.4
COL9A2-207ENST00000482722 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
COL9A2-207ENST00000482722 XRCC2O43543 280 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF205O95201 554 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 HEXBP07686 556 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 HCKP08631 526 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF20P17024 532 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.4
COL9A2-207ENST00000482722 P2RY1P47900 373 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 CCL20P78556 96 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 ACY1Q03154 408 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 CDCP2Q5VXM1 449 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 KLHL24Q6TFL4 600 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 PLXDC2Q6UX71 529 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 TMEM182Q6ZP80 229 aaPredicted RBP12.52□□□□□ -0.4
COL9A2-207ENST00000482722 ABHD12BQ7Z5M8 362 aaPredicted RBP12.52□□□□□ -0.4
COL9A2-207ENST00000482722 SLC38A9Q8NBW4 561 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 HPSE2Q8WWQ2 592 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 C11orf40Q8WZ69 217 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 LURAP1Q96LR2 239 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 TMEM59Q9BXS4 323 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 WNT16Q9UBV4 365 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 TMED3Q9Y3Q3 217 aa12.52□□□□□ -0.4
COL9A2-207ENST00000482722 CPAMD8Q8IZJ3 1885 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 OR5H15A6NDH6 313 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms