RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PLATP00750 562 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 CD1AP06126 327 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 FAM157CP0CG43 387 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 SRD5A1P18405 259 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 CELP19835 753 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 RAB3AP20336 220 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 SRP14P37108 136 aaKnown RBP17.39■□□□□ 0.37
SEC13-217ENST00000482647 ACSM1Q08AH1 577 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 IRF3Q14653 427 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 SPHARQ15513 63 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 C11orf91Q3C1V1 193 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 SLC25A26Q70HW3 274 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 MKXQ8IYA7 352 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 RAB40AQ8WXH6 277 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 TMEM106AQ96A25 262 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 POM121Q96HA1 1249 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 PGLYRP3Q96LB9 341 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 TMPRSS13Q9BYE2 586 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 CCDC90BQ9GZT6 254 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 INSIG2Q9Y5U4 225 aa17.39■□□□□ 0.37
SEC13-217ENST00000482647 JMJD1CQ15652 2540 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 PNMA8CA0A1B0GUJ8 204 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 NDUFB3O43676 98 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 HCKP08631 526 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 PSG2P11465 335 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 GABRA2P47869 451 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 PAX2Q02962 417 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 MED22Q15528 200 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 ZNF788Q6ZQV5 615 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 PRSS48Q7RTY5 328 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 FAM216BQ8N7L0 139 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 CEP19Q96LK0 163 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 HES4Q9HCC6 221 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 SMURF1Q9HCE7 757 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 MTCH1Q9NZJ7 389 aa17.38■□□□□ 0.37
SEC13-217ENST00000482647 LSM2Q9Y333 95 aaKnown RBP17.38■□□□□ 0.37
SEC13-217ENST00000482647 IGKV1D-17A0A075B6S4 117 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 IGHV2-70DA0A0C4DH43 119 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 TRBV5-5A0A0J9YX44 114 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 KIR2DS1A0A191URI9 304 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 MAGEB3O15480 346 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 ECDO95905 644 aaPredicted RBP17.37■□□□□ 0.37
SEC13-217ENST00000482647 AMY2BP19961 511 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 EEF1B2P24534 225 aaKnown RBP17.37■□□□□ 0.37
SEC13-217ENST00000482647 ERVK11-1P61568 191 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 RPS11P62280 158 aaKnown RBP eCLIP17.37■□□□□ 0.37
SEC13-217ENST00000482647 IL13RA1P78552 427 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 PDZK1IP1Q13113 114 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 IKZF1Q13422 519 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 Q499Y3 187 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 LRRC10Q5BKY1 277 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 ZNF529Q6P280 563 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 Q8IYB0 196 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 ST8SIA4Q92187 359 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 SLAMF9Q96A28 289 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 CPNE2Q96FN4 548 aaPredicted RBP17.37■□□□□ 0.37
SEC13-217ENST00000482647 OR5M11Q96RB7 305 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 MRI1Q9BV20 369 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 TAS2R4Q9NYW5 299 aa17.37■□□□□ 0.37
SEC13-217ENST00000482647 MXRA5Q9NR99 2828 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 A0A1B0GW55 424 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 RFPL4AA6NLU0 287 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 RFPL4AL1F8VTS6 287 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 GPR37O15354 613 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 ENSAO43768 121 aaKnown RBP17.36■□□□□ 0.37
SEC13-217ENST00000482647 INMTO95050 263 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 AVPP01185 164 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DUX4L2P0CJ85 424 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DUX4L3P0CJ86 424 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DUX4L4P0CJ87 422 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DUX4L5P0CJ88 424 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DUX4L6P0CJ89 424 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DUX4L7P0CJ90 424 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 PRDX2P32119 198 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 POU3F4P49335 361 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 PPP3R1P63098 170 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 PAX8Q06710 450 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DOC2BQ14184 412 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 KISS1Q15726 138 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DUX4L9Q6RFH8 374 aaPredicted RBP17.36■□□□□ 0.37
SEC13-217ENST00000482647 BATF2Q8N1L9 274 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 OR13C5Q8NGS8 318 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 SDSLQ96GA7 329 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 GAFA1Q96PS6 74 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 SPACA5Q96QH8 159 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 NUDT16L1Q9BRJ7 211 aaKnown RBP17.36■□□□□ 0.37
SEC13-217ENST00000482647 CKLFQ9UBR5 152 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 DUX4Q9UBX2 424 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 ZNF222Q9UK12 451 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 AUP1Q9Y679 476 aa17.36■□□□□ 0.37
SEC13-217ENST00000482647 C22orf46C9J442 243 aa17.35■□□□□ 0.37
SEC13-217ENST00000482647 SIGLEC5O15389 551 aa17.35■□□□□ 0.37
SEC13-217ENST00000482647 LIPFP07098 398 aa17.35■□□□□ 0.37
SEC13-217ENST00000482647 BTN2A1Q7KYR7 527 aa17.35■□□□□ 0.37
SEC13-217ENST00000482647 MS4A15Q8N5U1 240 aa17.35■□□□□ 0.37
SEC13-217ENST00000482647 RFT1Q96AA3 541 aa17.35■□□□□ 0.37
SEC13-217ENST00000482647 DACT3Q96B18 629 aaPredicted RBP17.35■□□□□ 0.37
SEC13-217ENST00000482647 OPN4Q9UHM6 478 aa17.35■□□□□ 0.37
SEC13-217ENST00000482647 ZNF879B4DU55 563 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 F8VVB4 439 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms