RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 SYS1Q8N2H4 156 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 KIR3DL3Q8N743 410 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 PACRGLQ8N7B6 248 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 OR52I1Q8NGK6 324 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 OR13C3Q8NGS6 347 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 C8orf46Q8TAG6 207 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 APH1BQ8WW43 257 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 FGGYQ96C11 551 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 SDSLQ96GA7 329 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 NRIP2Q9BQI9 281 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 OR14J1Q9UGF5 321 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 ZNF222Q9UK12 451 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 MAB21L2Q9Y586 359 aa12.22□□□□□ -0.45
OPTN-210ENST00000482140 IGHV1-69DA0A0B4J2H0 117 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 MDFIC2A0A1B0GVS7 189 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 INMTO95050 263 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 CYB5AP00167 134 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 IGHV1-69P01742 117 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 RPSAP08865 295 aaKnown RBP12.21□□□□□ -0.45
OPTN-210ENST00000482140 PEX2P28328 305 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 PRDX2P32119 198 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 RBP2P50120 134 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 GBX2P52951 348 aaPredicted RBP12.21□□□□□ -0.45
OPTN-210ENST00000482140 ZNF691Q5VV52 312 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 EGFL6Q8IUX8 553 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 PDZD9Q8IXQ8 264 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 FAM185AQ8N0U4 392 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 ZNF561Q8N587 486 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 SETD9Q8NE22 299 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.45
OPTN-210ENST00000482140 ADAT3Q96EY9 351 aaPredicted RBP12.21□□□□□ -0.45
OPTN-210ENST00000482140 CEP19Q96LK0 163 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 COMMD4Q9H0A8 199 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 ISG20L2Q9H9L3 353 aaKnown RBP12.21□□□□□ -0.45
OPTN-210ENST00000482140 ELL3Q9HB65 397 aaPredicted RBP12.21□□□□□ -0.45
OPTN-210ENST00000482140 SIRT7Q9NRC8 400 aa12.21□□□□□ -0.45
OPTN-210ENST00000482140 MRPS18AQ9NVS2 196 aaKnown RBP12.21□□□□□ -0.45
OPTN-210ENST00000482140 TRBV23-1A0A0A0MS06 115 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 IRGMA1A4Y4 181 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 TMEM89A2RUT3 159 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 OR4C45A6NMZ5 311 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 ANKRD65E5RJM6 399 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 CLIC3O95833 236 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 CCDC159P0C7I6 412 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 ATF1P18846 271 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 PRKACBP22694 351 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 AZGP1P25311 298 aaKnown RBP12.2□□□□□ -0.46
OPTN-210ENST00000482140 CEBPDP49716 269 aaPredicted RBP12.2□□□□□ -0.46
OPTN-210ENST00000482140 GUCA2AQ02747 115 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 SLC9A3R2Q15599 337 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 SMN1Q16637 294 aaKnown RBP12.2□□□□□ -0.46
OPTN-210ENST00000482140 LHFPL2Q6ZUX7 228 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 SLC25A26Q70HW3 274 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 UTS2BQ765I0 119 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 DHRSXQ8N5I4 330 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 CD177Q8N6Q3 437 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 DNAAF1Q8NEP3 725 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 CNIH3Q8TBE1 160 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 HAVCR2Q8TDQ0 301 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 SLAMF9Q96A28 289 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 C1orf147Q96MC9 270 aaPredicted RBP12.2□□□□□ -0.46
OPTN-210ENST00000482140 NEK6Q9HC98 313 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 HES4Q9HCC6 221 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 NOX4Q9NPH5 578 aa12.2□□□□□ -0.46
OPTN-210ENST00000482140 IGKV1-27A0A075B6S5 117 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 A0A1W2PPH5 198 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 TMEM212A6NML5 194 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 CLDN34H7C241 214 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 M0R1W7 72 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 HOXA3O43365 443 aaPredicted RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 WBP4O75554 376 aaKnown RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 KNG1P01042 644 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 RNASE1P07998 156 aaKnown RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 EEF1B2P24534 225 aaKnown RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 POU3F4P49335 361 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 MTCP1P56278 107 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 ERVK11-1P61568 191 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 FIP1L1Q6UN15 594 aaKnown RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 MKXQ8IYA7 352 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 Q8IYB0 196 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 ASCC1Q8N9N2 400 aaKnown RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 OR51A4Q8NGJ6 313 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 OR10AC1Q8NH08 325 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 OR5AK2Q8NH90 309 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 TSEN15Q8WW01 171 aaKnown RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 EMG1Q92979 244 aaKnown RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 SPSB1Q96BD6 273 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 VCXQ9H320 206 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 FGF20Q9NP95 211 aaPredicted RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 TNFRSF19Q9NS68 423 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 CAB39Q9Y376 341 aaPredicted RBP12.19□□□□□ -0.46
OPTN-210ENST00000482140 FAM96BQ9Y3D0 163 aa12.19□□□□□ -0.46
OPTN-210ENST00000482140 TRBV2A0A0J9YWF9 115 aa12.18□□□□□ -0.46
OPTN-210ENST00000482140 H0YAE9 185 aa12.18□□□□□ -0.46
OPTN-210ENST00000482140 MYL12AP19105 171 aa12.18□□□□□ -0.46
OPTN-210ENST00000482140 DCKP27707 260 aa12.18□□□□□ -0.46
OPTN-210ENST00000482140 COMPP49747 757 aaPredicted RBP12.18□□□□□ -0.46
OPTN-210ENST00000482140 RPL31P62899 125 aaKnown RBP12.18□□□□□ -0.46
OPTN-210ENST00000482140 MED21Q13503 144 aa12.18□□□□□ -0.46
OPTN-210ENST00000482140 NCR3LG1Q68D85 454 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms