RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 DUSP1P28562 367 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 MAGEB1P43366 347 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 FCN2Q15485 313 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 IGFBP7Q16270 282 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 DBX2Q6ZNG2 339 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 ASCL5Q7RTU5 278 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 TMEM165Q9HC07 324 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 TRBV5-7A0A0A0MS05 114 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 IGHV3-64DA0A0J9YX35 117 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 K7EPK0 472 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 SORDQ00796 357 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 PDZD9Q8IXQ8 264 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 FAM71E2Q8N5Q1 922 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 RAB1CQ92928 201 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 ADAT3Q96EY9 351 aaPredicted RBP16.81■□□□□ 0.28
CCM2-214ENST00000481194 SEC22CQ9BRL7 303 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 NXF2Q9GZY0 626 aaKnown RBP16.81■□□□□ 0.28
CCM2-214ENST00000481194 LRRC3CA6NJW4 275 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 CEACAM21Q3KPI0 293 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 HIPK2Q9H2X6 1198 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 RNF7Q9UBF6 113 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 SIRT4Q9Y6E7 314 aaPredicted RBP16.81■□□□□ 0.28
CCM2-214ENST00000481194 NINQ8N4C6 2090 aa16.81■□□□□ 0.28
CCM2-214ENST00000481194 IAH1Q2TAA2 248 aaPredicted RBP16.8■□□□□ 0.28
CCM2-214ENST00000481194 FAM209AQ5JX71 171 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 NSUN5P2Q63ZY6 315 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 PRSS33Q8NF86 280 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 OR10X1Q8NGY0 326 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 ZNF75AQ96N20 296 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 DLL4Q9NR61 685 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 KLK11Q9UBX7 282 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 MLXQ9UH92 298 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 LIPGQ9Y5X9 500 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 CALCRP30988 508 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 PDZK1IP1Q13113 114 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 H3F3CQ6NXT2 135 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 LYPD8Q6UX82 237 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 TRAV8-7A0A075B6U6 113 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 OR8U9P0C7N5 309 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 HBG1P69891 147 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 HBG2P69892 147 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 LAIR2Q6ISS4 152 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 BTLAQ7Z6A9 289 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 LYG2Q86SG7 212 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 PBDC1Q9BVG4 233 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 GAL3ST2Q9H3Q3 398 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 TREM1Q9NP99 234 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 CA10Q9NS85 328 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 FBXO7Q9Y3I1 522 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 FABP7O15540 132 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 ADAM11O75078 769 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 KRBOX4Q5JUW0 171 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 MED30Q96HR3 178 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 OR6C3Q9NZP0 311 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 KLK13Q9UKR3 277 aa16.8■□□□□ 0.28
CCM2-214ENST00000481194 HOXA1P49639 335 aaPredicted RBP16.79■□□□□ 0.28
CCM2-214ENST00000481194 OR10AC1Q8NH08 325 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 SULT4A1Q9BR01 284 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 WNT5BQ9H1J7 359 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 DEPPQ9NTK1 212 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 ST8SIA5O15466 376 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 ENSAO43768 121 aaKnown RBP16.79■□□□□ 0.28
CCM2-214ENST00000481194 CAMLGP49069 296 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 UNQ9370/PRO34162Q6UXP9 181 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 OR14K1Q8NGZ2 314 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 AMELYQ99218 206 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 RANGRFQ9HD47 186 aaPredicted RBP16.79■□□□□ 0.28
CCM2-214ENST00000481194 KIF25Q9UIL4 384 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 SS18L1O75177 396 aaPredicted RBP16.79■□□□□ 0.28
CCM2-214ENST00000481194 RAB11AP62491 216 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 GUCA2AQ02747 115 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 RHOFQ9HBH0 211 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 MSRB2Q9Y3D2 182 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 GPR31O00270 319 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 TSPAN4O14817 238 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 ZBTB25P24278 435 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 DEFA5Q01523 94 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 TRMT61AQ96FX7 289 aaKnown RBP16.79■□□□□ 0.28
CCM2-214ENST00000481194 SUCNR1Q9BXA5 334 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 GON7Q9BXV9 100 aa16.79■□□□□ 0.28
CCM2-214ENST00000481194 PTPRSQ13332 1948 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 hADV38S2A0JD32 116 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 FAM221AA4D161 298 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 RAB7AP51149 207 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 GAS1P54826 345 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 ACSF3Q4G176 576 aaPredicted RBP16.78■□□□□ 0.28
CCM2-214ENST00000481194 H2BFWTQ7Z2G1 175 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 RDH8Q9NYR8 311 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 URB1O60287 2271 aaKnown RBP16.78■□□□□ 0.28
CCM2-214ENST00000481194 SDCBPO00560 298 aaPredicted RBP16.78■□□□□ 0.28
CCM2-214ENST00000481194 OR4E1P0C645 316 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 ANKRD20A5PA0PJZ0 165 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 NDUFB6O95139 128 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 PTGDSP41222 190 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 SNRPNP63162 240 aaKnown RBP16.78■□□□□ 0.28
CCM2-214ENST00000481194 TSNAXQ99598 290 aaKnown RBP16.78■□□□□ 0.28
CCM2-214ENST00000481194 G6PC2Q9NQR9 355 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCM2-214ENST00000481194 KIAA1549LQ6ZVL6 1849 aa16.78■□□□□ 0.28
CCM2-214ENST00000481194 Q0VFX4 171 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms