RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 NLKQ9UBE8 527 aa16.95■□□□□ 0.3
CTSA-206ENST00000480961 POLDIP2Q9Y2S7 368 aa16.95■□□□□ 0.3
CTSA-206ENST00000480961 OR2AT4A6NND4 320 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 NDUFA2O43678 99 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 ANGPTL7O43827 346 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 NXPH2O95156 264 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 RAB3AP20336 220 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 GABRA2P47869 451 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 BDH1Q02338 343 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 IKZF1Q13422 519 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 Q499Y3 187 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 FAM120AOSQ5T036 256 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 LIPKQ5VXJ0 399 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 WDR25Q64LD2 544 aaPredicted RBP16.94■□□□□ 0.3
CTSA-206ENST00000480961 ACP7Q6ZNF0 438 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 SATL1Q86VE3 508 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 ANGPTL6Q8NI99 470 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 CLN8Q9UBY8 286 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 LRCH1Q9Y2L9 728 aa16.94■□□□□ 0.3
CTSA-206ENST00000480961 YLPM1P49750 1951 aaKnown RBP16.93■□□□□ 0.3
CTSA-206ENST00000480961 IGKV1D-17A0A075B6S4 117 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 DVL1O14640 695 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 NOS1APO75052 506 aaPredicted RBP16.93■□□□□ 0.3
CTSA-206ENST00000480961 CD1AP06126 327 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 PSG2P11465 335 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 NPBWR2P48146 333 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 CEBPDP49716 269 aaPredicted RBP16.93■□□□□ 0.3
CTSA-206ENST00000480961 PDZK1IP1Q13113 114 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 CRIP3Q6Q6R5 217 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 TMEM203Q969S6 136 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 C12orf43Q96C57 262 aaKnown RBP16.93■□□□□ 0.3
CTSA-206ENST00000480961 CEP19Q96LK0 163 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 NEK6Q9HC98 313 aa16.93■□□□□ 0.3
CTSA-206ENST00000480961 TRAV8-7A0A075B6U6 113 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 TRBV5-7A0A0A0MS05 114 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 RFPL4AA6NLU0 287 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 ZNF879B4DU55 563 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 RFPL4AL1F8VTS6 287 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 PIN1P1O15428 100 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 BCL3P20749 454 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 GABARAPL2P60520 117 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 ERVK11-1P61568 191 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 EMX1Q04741 257 aaPredicted RBP16.92■□□□□ 0.3
CTSA-206ENST00000480961 KISS1Q15726 138 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 DCAF12L2Q5VW00 463 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 ZNF529Q6P280 563 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 OR52N4Q8NGI2 321 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 ST8SIA4Q92187 359 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 UFD1Q92890 307 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 GAFA1Q96PS6 74 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 ACOT13Q9NPJ3 140 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 RASL12Q9NYN1 266 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 OR14J1Q9UGF5 321 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 OR5V1Q9UGF6 321 aa16.92■□□□□ 0.3
CTSA-206ENST00000480961 MALRD1Q5VYJ5 2156 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 LOC105371242A0A075B767 164 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 IGKV1-12A0A0C4DH73 117 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 ALX3O95076 343 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 IGKV1D-12P01611 117 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 TGFBR2P37173 567 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 PPP3R1P63098 170 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 SMIM21Q3B7S5 101 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 ACSM3Q53FZ2 586 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 MKXQ8IYA7 352 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 SPARTQ8N0X7 666 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 CD177Q8N6Q3 437 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 DERL3Q96Q80 235 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 MGLLQ99685 303 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 BEX2Q9BXY8 128 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 YTHDF1Q9BYJ9 559 aaKnown RBP16.91■□□□□ 0.3
CTSA-206ENST00000480961 NOX4Q9NPH5 578 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 RBFOX1Q9NWB1 397 aaKnown RBP16.91■□□□□ 0.3
CTSA-206ENST00000480961 IL36RNQ9UBH0 155 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 KAAG1Q9UBP8 84 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 METRNQ9UJH8 293 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 ZNF222Q9UK12 451 aa16.91■□□□□ 0.3
CTSA-206ENST00000480961 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.91■□□□□ 0.39e-13■■■■□ 20.1
CTSA-206ENST00000480961 A0A0G2JMP0 313 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 A0A0X1KG70 313 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 MAGEA13PA6NCF6 341 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 NKX6-3A6NJ46 265 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 A8MXK9 166 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 C22orf46C9J442 243 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 MAGEB3O15480 346 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 CRLF1O75462 422 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 CYB5AP00167 134 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 AVPP01185 164 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 ACAA1P09110 424 aaPredicted RBP16.9■□□□□ 0.3
CTSA-206ENST00000480961 TMEM225BP0DP42 221 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 IGFBP3P17936 291 aaPredicted RBP16.9■□□□□ 0.3
CTSA-206ENST00000480961 CPT2P23786 658 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 PRDX2P32119 198 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 SNU13P55769 128 aaKnown RBP16.9■□□□□ 0.3
CTSA-206ENST00000480961 RPS25P62851 125 aaKnown RBP16.9■□□□□ 0.3
CTSA-206ENST00000480961 TPBGQ13641 420 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 TBCEQ15813 527 aaPredicted RBP16.9■□□□□ 0.3
CTSA-206ENST00000480961 DGUOKQ16854 277 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 FAM27D1Q5T7N8 215 aa16.9■□□□□ 0.3
CTSA-206ENST00000480961 ATPAF1Q5TC12 328 aaPredicted RBP16.9■□□□□ 0.3
CTSA-206ENST00000480961 ZNF788Q6ZQV5 615 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms