RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 FUT6P51993 359 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 NANOS3P60323 173 aaKnown RBP13.98□□□□□ -0.17
HSPG2-209ENST00000480900 ERVK11-1P61568 191 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 GUCA2AQ02747 115 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 RAB40BQ12829 278 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 FOXL1Q12952 345 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 GALEQ14376 348 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 CNN3Q15417 329 aaKnown RBP13.98□□□□□ -0.17
HSPG2-209ENST00000480900 AWAT1Q58HT5 328 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 ANGPTL5Q86XS5 388 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 SYS1Q8N2H4 156 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 TMEM86BQ8N661 226 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 CD177Q8N6Q3 437 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 Q8N7P7 452 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 C3orf56Q8N813 242 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 PELI1Q96FA3 418 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 C4orf36Q96KX1 117 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 ALG8Q9BVK2 526 aa13.98□□□□□ -0.17
HSPG2-209ENST00000480900 UNKLQ9H9P5 680 aaKnown RBP13.98□□□□□ -0.17
HSPG2-209ENST00000480900 ELL3Q9HB65 397 aaPredicted RBP13.98□□□□□ -0.17
HSPG2-209ENST00000480900 IGKV1-27A0A075B6S5 117 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 PRDX2P32119 198 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 CAPZA1P52907 286 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 C16orf87Q6PH81 154 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 UTS2BQ765I0 119 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 DNAAF1Q8NEP3 725 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 ADAT3Q96EY9 351 aaPredicted RBP13.97□□□□□ -0.17
HSPG2-209ENST00000480900 BORCS8Q96FH0 119 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 SIRT7Q9NRC8 400 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 MRPS18AQ9NVS2 196 aaKnown RBP13.97□□□□□ -0.17
HSPG2-209ENST00000480900 HHLA2Q9UM44 414 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 MYRFQ9Y2G1 1151 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 RPL36Q9Y3U8 105 aaKnown RBP13.97□□□□□ -0.17
HSPG2-209ENST00000480900 POMT1Q9Y6A1 747 aa13.97□□□□□ -0.17
HSPG2-209ENST00000480900 KIAA2026Q5HYC2 2103 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 OR4C45A6NMZ5 311 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 KNG1P01042 644 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 MELTFP08582 738 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 ZNF20P17024 532 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 MRPL28Q13084 256 aaKnown RBP13.96□□□□□ -0.17
HSPG2-209ENST00000480900 ALKBH1Q13686 389 aaKnown RBP13.96□□□□□ -0.17
HSPG2-209ENST00000480900 BLMHQ13867 455 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 LHFPL3Q86UP9 236 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 PDZD9Q8IXQ8 264 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 ZNF555Q8NEP9 628 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 APH1BQ8WW43 257 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 SSMEM1Q8WWF3 244 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 CEP19Q96LK0 163 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 METTL8Q9H825 291 aaKnown RBP13.96□□□□□ -0.17
HSPG2-209ENST00000480900 AMBNQ9NP70 447 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 C8orf4Q9NR00 106 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 ERVK13-1Q9NX77 482 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 MTCH1Q9NZJ7 389 aa13.96□□□□□ -0.17
HSPG2-209ENST00000480900 A0A0U1RQK1 487 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 RNASEK-C17orf49H0YIS7 233 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 RPSAP08865 295 aaKnown RBP13.95□□□□□ -0.18
HSPG2-209ENST00000480900 PRKACBP22694 351 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 EEF1B2P24534 225 aaKnown RBP13.95□□□□□ -0.18
HSPG2-209ENST00000480900 RBP2P50120 134 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 ATP1B3P54709 279 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 KLHL22Q53GT1 634 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 LPCAT4Q643R3 524 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 NCR3LG1Q68D85 454 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 SLC25A26Q70HW3 274 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 LDLRAD3Q86YD5 345 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 Q8IYB0 196 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 FAM185AQ8N0U4 392 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 OR52I1Q8NGK6 324 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 TNFRSF14Q92956 283 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 FGGYQ96C11 551 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 ZNF649Q9BS31 505 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 FAM234AQ9H0X4 552 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 OR14J1Q9UGF5 321 aa13.95□□□□□ -0.18
HSPG2-209ENST00000480900 CAB39Q9Y376 341 aaPredicted RBP13.95□□□□□ -0.18
HSPG2-209ENST00000480900 IGKV1-9A0A0C4DH69 117 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 WBP4O75554 376 aaKnown RBP13.94□□□□□ -0.18
HSPG2-209ENST00000480900 ATF1P18846 271 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 CEBPDP49716 269 aaPredicted RBP13.94□□□□□ -0.18
HSPG2-209ENST00000480900 RPL31P62899 125 aaKnown RBP13.94□□□□□ -0.18
HSPG2-209ENST00000480900 BATF2Q8N1L9 274 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 PACRGLQ8N7B6 248 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 ZNF676Q8N7Q3 588 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 OR5D13Q8NGL4 314 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 OR13C3Q8NGS6 347 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 OR10AC1Q8NH08 325 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 TBC1D15Q8TC07 691 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 HAVCR2Q8TDQ0 301 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 SLAMF9Q96A28 289 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 SPSB1Q96BD6 273 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 JAM3Q9BX67 310 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 ISG20L2Q9H9L3 353 aaKnown RBP13.94□□□□□ -0.18
HSPG2-209ENST00000480900 C19orf12Q9NSK7 152 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 FAM96BQ9Y3D0 163 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 MGAM2Q2M2H8 2515 aa13.94□□□□□ -0.18
HSPG2-209ENST00000480900 A0A1W2PPH5 198 aa13.93□□□□□ -0.18
HSPG2-209ENST00000480900 TMEM212A6NML5 194 aa13.93□□□□□ -0.18
HSPG2-209ENST00000480900 F8VVB4 439 aa13.93□□□□□ -0.18
HSPG2-209ENST00000480900 F8VWA3 439 aa13.93□□□□□ -0.18
HSPG2-209ENST00000480900 NPFFO15130 113 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms