RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 NXNL2Q5VZ03 156 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 TMEM200BQ69YZ2 307 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 C1QL4Q86Z23 238 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 OR4C13Q8NGP0 309 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 OR14K1Q8NGZ2 314 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 TRMT10AQ8TBZ6 339 aaKnown RBP12.41□□□□□ -0.42
LIMS3-203ENST00000480744 TMEM163Q8TC26 289 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 MNTQ99583 582 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 NRIP2Q9BQI9 281 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 GABARAPL1Q9H0R8 117 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 HEXA-AS1Q9H8Q6 139 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 CLN6Q9NWW5 311 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 USE1Q9NZ43 259 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 MRM2Q9UI43 246 aaKnown RBP12.41□□□□□ -0.42
LIMS3-203ENST00000480744 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.41□□□□□ -0.42
LIMS3-203ENST00000480744 OAZ3Q9UMX2 235 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 SLC22A13Q9Y226 551 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 SNX5Q9Y5X3 404 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 V9GYS6 101 aa12.41□□□□□ -0.42
LIMS3-203ENST00000480744 A0A1B0GTI1 187 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 hCG_1809904A0A1W2PP81 198 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 A0A1W2PPE2 198 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 FAM230AA0A1W2PPH8 454 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 A0A1W2PR64 198 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 A0A1W2PRV1 198 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 SAC3D1A6NKF1 404 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 G3V2T6 193 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 KRT8P05787 483 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 CSF1P09603 554 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 FCGR1AP12314 374 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 EPHA2P29317 976 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 LGALS4P56470 323 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 ERVFRD-1P60508 538 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 GABPB1Q06547 395 aaPredicted RBP12.4□□□□□ -0.42
LIMS3-203ENST00000480744 ZNF273Q14593 569 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 AADACL4Q5VUY2 407 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 TMEM42Q69YG0 159 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 C12orf73Q69YU5 71 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 ZNF782Q6ZMW2 699 aaPredicted RBP12.4□□□□□ -0.42
LIMS3-203ENST00000480744 Q6ZTK2 550 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 ANGPTL5Q86XS5 388 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 GID4Q8IVV7 300 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 YIPF7Q8N8F6 280 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 ASCC1Q8N9N2 400 aaKnown RBP12.4□□□□□ -0.42
LIMS3-203ENST00000480744 PPP1R35Q8TAP8 253 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 CENPNQ96H22 339 aaPredicted RBP12.4□□□□□ -0.42
LIMS3-203ENST00000480744 AJUBAQ96IF1 538 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 PLEKHA1Q9HB21 404 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 FBLN5Q9UBX5 448 aa12.4□□□□□ -0.42
LIMS3-203ENST00000480744 MEX3AA1L020 520 aaKnown RBP12.39□□□□□ -0.43
LIMS3-203ENST00000480744 ZAR1LA6NP61 321 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 NOS1APO75052 506 aaPredicted RBP12.39□□□□□ -0.43
LIMS3-203ENST00000480744 INMTO95050 263 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 TK1P04183 234 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 ZSCAN26Q16670 478 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 PLA1AQ53H76 456 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 KDM4DQ6B0I6 523 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 HIST2H2BDQ6DRA6 164 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 SSX6Q7RTT6 188 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 CALHM1Q8IU99 346 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 NKX3-1Q99801 234 aaPredicted RBP12.39□□□□□ -0.43
LIMS3-203ENST00000480744 MEGF9Q9H1U4 602 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 SLC7A11Q9UPY5 501 aa12.39□□□□□ -0.43
LIMS3-203ENST00000480744 APOL3O95236 402 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 COL10A1Q03692 680 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 HERPUD1Q15011 391 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 ZFP1Q6P2D0 407 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 ZDHHC13Q8IUH4 622 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 C11orf42Q8N5U0 333 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 CIB1Q99828 191 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 PKIBQ9C010 78 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 HES4Q9HCC6 221 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 S100A14Q9HCY8 104 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 RAB18Q9NP72 206 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 FOXJ3Q9UPW0 622 aa12.38□□□□□ -0.43
LIMS3-203ENST00000480744 DHRS7CA6NNS2 312 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 SYT7O43581 403 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 MPZP25189 248 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 KIR2DS4P43632 304 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 EFNB2P52799 333 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 EDDM3BP56851 147 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 EFNB1P98172 346 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 IL24Q13007 206 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 AANATQ16613 207 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 LHFPL4Q7Z7J7 247 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 CATSPERDQ86XM0 798 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 KLHDC1Q8N7A1 406 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 OR10H4Q8NGA5 316 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 SLAMF9Q96A28 289 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 ADI1Q9BV57 179 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 NPFFR1Q9GZQ6 430 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 WARS2Q9UGM6 360 aaKnown RBP12.37□□□□□ -0.43
LIMS3-203ENST00000480744 ENOPH1Q9UHY7 261 aa12.37□□□□□ -0.43
LIMS3-203ENST00000480744 A0A1W2PQL4 384 aaPredicted RBP12.36□□□□□ -0.43
LIMS3-203ENST00000480744 METTL15A6NJ78 407 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 K7N7A8 449 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 PLXNB1O43157 2135 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 CHST1O43916 411 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms