RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ZNF16P17020 682 aaPredicted RBP16.47■□□□□ 0.23
LIME1-205ENST00000480139 ZP1P60852 638 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 RPS25P62851 125 aaKnown RBP16.47■□□□□ 0.23
LIME1-205ENST00000480139 SSX1Q16384 188 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 CDH26Q8IXH8 852 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 TSPAN14Q8NG11 270 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 OR52N4Q8NGI2 321 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 OR51F2Q8NH61 342 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 ORAI1Q96D31 301 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 SEH1LQ96EE3 360 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 SPACA5Q96QH8 159 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 NR1H4Q96RI1 486 aaPredicted RBP16.47■□□□□ 0.23
LIME1-205ENST00000480139 POLR3KQ9Y2Y1 108 aaPredicted RBP16.47■□□□□ 0.23
LIME1-205ENST00000480139 TLN2Q9Y4G6 2542 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 CSPG4Q6UVK1 2322 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 A0A087WXM4 84 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 A0A1W2PPK0 400 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 OR2AT4A6NND4 320 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 CCRL2O00421 344 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 FOXH1O75593 365 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 RGS9O75916 674 aaPredicted RBP16.46■□□□□ 0.23
LIME1-205ENST00000480139 NXPH2O95156 264 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 GYPAP02724 150 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 UCHL1P09936 223 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 POU3F4P49335 361 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 NPY4RP50391 375 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 INSL4Q14641 139 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 ESCO2Q56NI9 601 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 SYT6Q5T7P8 510 aaPredicted RBP16.46■□□□□ 0.23
LIME1-205ENST00000480139 DDI2Q5TDH0 399 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 LYPD2Q6UXB3 125 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 TMEM91Q6ZNR0 172 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 CEACAM19Q7Z692 300 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 ANGPTL6Q8NI99 470 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 TMEM203Q969S6 136 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 SLAMF9Q96A28 289 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 ZNF488Q96MN9 340 aa16.46■□□□□ 0.23
LIME1-205ENST00000480139 GSX1Q9H4S2 264 aaPredicted RBP16.46■□□□□ 0.23
LIME1-205ENST00000480139 TRAV20A0A0B4J274 112 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 TRAPPC2LH3BP13 241 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 ADAM20O43506 726 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 KDM4BO94953 1096 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 INMTO95050 263 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 PLATP00750 562 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 GALP22466 123 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 PSMB9P28065 219 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 PITPNBP48739 271 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 DVL1P1P54792 670 aaPredicted RBP16.45■□□□□ 0.22
LIME1-205ENST00000480139 GMFBP60983 142 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 SEC61A1P61619 476 aaKnown RBP16.45■□□□□ 0.22
LIME1-205ENST00000480139 FAM166AQ6J272 317 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 CD200R1LQ6Q8B3 271 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 ZNF841Q6ZN19 808 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 SLC36A1Q7Z2H8 476 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 RNF144BQ7Z419 303 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 NKAIN3Q8N8D7 197 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 PXT1Q8NFP0 134 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 RFT1Q96AA3 541 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 SSBP3Q9BWW4 388 aaPredicted RBP16.45■□□□□ 0.22
LIME1-205ENST00000480139 CTSZQ9UBR2 303 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 ZNF222Q9UK12 451 aa16.45■□□□□ 0.22
LIME1-205ENST00000480139 TEP1Q99973 2627 aaKnown RBP16.45■□□□□ 0.22
LIME1-205ENST00000480139 IGKV1D-17A0A075B6S4 117 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 PPIAL4CA0A0B4J2A2 164 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 MEGF11A6BM72 1044 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 NKX6-3A6NJ46 265 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 TRIM64CA6NLI5 447 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 KIAA1324LA8MWY0 1029 aaPredicted RBP16.44■□□□□ 0.22
LIME1-205ENST00000480139 GABRPO00591 440 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 TMPRSS2O15393 492 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 SPRY1O43609 319 aaPredicted RBP16.44■□□□□ 0.22
LIME1-205ENST00000480139 ARL6IP5O75915 188 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 KNG1P01042 644 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 TGFAP01135 160 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 PSG2P11465 335 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 ZNF93P35789 620 aaPredicted RBP16.44■□□□□ 0.22
LIME1-205ENST00000480139 GP2P55259 537 aaKnown RBP16.44■□□□□ 0.22
LIME1-205ENST00000480139 FABP5Q01469 135 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 C11orf91Q3C1V1 193 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 HSD17B12Q53GQ0 312 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 ASCL4Q6XD76 172 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 ZNF788Q6ZQV5 615 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 GLCCI1Q86VQ1 547 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 PNLDC1Q8NA58 520 aaKnown RBP16.44■□□□□ 0.22
LIME1-205ENST00000480139 OR5D18Q8NGL1 313 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 GPER1Q99527 375 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 SEBOXQ9HB31 216 aaPredicted RBP16.44■□□□□ 0.22
LIME1-205ENST00000480139 SMURF1Q9HCE7 757 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 TCF7L1Q9HCS4 588 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 SNTG1Q9NSN8 517 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 CLN8Q9UBY8 286 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 MALRD1Q5VYJ5 2156 aa16.44■□□□□ 0.22
LIME1-205ENST00000480139 NSD1Q96L73 2696 aaPredicted RBP16.43■□□□□ 0.22
LIME1-205ENST00000480139 IGKV1-12A0A0C4DH73 117 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 MAGEA13PA6NCF6 341 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 F8VVB4 439 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 F8VWA3 439 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 ANGPTL7O43827 346 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 IGKV1D-12P01611 117 aa16.43■□□□□ 0.22
LIME1-205ENST00000480139 TMEM225BP0DP42 221 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms