RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 HRH4Q9H3N8 390 aa21.43■■□□□ 1.02
SYNGAP1-206ENST00000479510 KLF2Q9Y5W3 355 aaPredicted RBP21.43■■□□□ 1.02
SYNGAP1-206ENST00000479510 NSG1A0A0A6YYJ2 146 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 IGHEP01854 428 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 FCGR3AP08637 254 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 ZNF728P0DKX0 622 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 FCGR2CP31995 323 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 PMELP40967 661 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 SPEM2Q0P670 501 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 BTNL8Q6UX41 500 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 ZNF837Q96EG3 531 aaPredicted RBP21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 BORCS8Q96FH0 119 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 HDHD3Q9BSH5 251 aaPredicted RBP21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 FAAP24Q9BTP7 215 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 NAA60Q9H7X0 242 aa21.42■■□□□ 1.02
SYNGAP1-206ENST00000479510 NTN3O00634 580 aaPredicted RBP21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 MED6O75586 246 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 PVALBP20472 110 aaPredicted RBP21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 F2RL1P55085 397 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 RIPPLY2Q5TAB7 128 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 UBAC2Q8NBM4 344 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 BCO1Q9HAY6 547 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 FAM230AA0A1W2PPH8 454 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 E5RGE8 158 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 MSTNO14793 375 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 CD5P06127 495 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 LPAR6P43657 344 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 PIGPP57054 158 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 PCBD1P61457 104 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 TAF9Q16594 264 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 HLA-CQ95604 372 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 ARV1Q9H2C2 271 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 FBXL17Q9UF56 701 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 NSG2Q9Y328 171 aa21.41■■□□□ 1.02
SYNGAP1-206ENST00000479510 EML6Q6ZMW3 1958 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 IGKV1-27A0A075B6S5 117 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 ZNF850A8MQ14 1090 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 RNASEK-C17orf49H0YIS7 233 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 LCATP04180 440 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 MUC1P15941 1255 aaPredicted RBP21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 DUSP3P51452 185 aaPredicted RBP21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 UCP3P55916 312 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 ZFP36L1Q07352 338 aaKnown RBP21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 OR8B8Q15620 311 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 ZNF774Q6NX45 483 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 OR2AE1Q8NHA4 323 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 LYPD6BQ8NI32 183 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 MRPL24Q96A35 216 aaKnown RBP21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 AMDHD2Q9Y303 409 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 TIMM10BQ9Y5J6 103 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 CCDC187A0A096LP49 1063 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 NRASP01111 189 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 TMEM187Q14656 261 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 ABCA11PQ4W5N1 156 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 OR2A2Q6IF42 318 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 CRLF2Q9HC73 371 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 ZNF175Q9Y473 711 aa21.4■■□□□ 1.02
SYNGAP1-206ENST00000479510 ZNF716A6NP11 495 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 G3V3Y1 287 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 H7C1Q1 480 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 ANGPTL7O43827 346 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 FBXO24O75426 580 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 FOLR3P41439 243 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 FUT6P51993 359 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 TMEM33P57088 247 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 CARD18P57730 90 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 CHAF1BQ13112 559 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 TMEM88Q6PEY1 159 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 OSR2Q8N2R0 312 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 COMMD1Q8N668 190 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 SULT4A1Q9BR01 284 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 MLXQ9UH92 298 aa21.39■■□□□ 1.01
SYNGAP1-206ENST00000479510 SPRY1O43609 319 aaPredicted RBP21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 GPR157Q5UAW9 335 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 ABLIM2Q6H8Q1 611 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 AAED1Q7RTV5 226 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 FOXRED2Q8IWF2 684 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 IQCF2Q8IXL9 164 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 SLC7A11Q9UPY5 501 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 KIAA1549Q9HCM3 1950 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 P04436 131 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 ZNF32P17041 273 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 NME2P22392 152 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 HGFACQ04756 655 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 GGNQ86UU5 652 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 RTN4IP1Q8WWV3 396 aaPredicted RBP21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 SYT3Q9BQG1 590 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 LIME1Q9H400 295 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 ZNF286AQ9HBT8 521 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 MRPS18CQ9Y3D5 142 aaKnown RBP21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 SDK1Q7Z5N4 2213 aa21.38■■□□□ 1.01
SYNGAP1-206ENST00000479510 GDF9O60383 454 aa21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 RCC1P18754 421 aaPredicted RBP21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 HTR5AP47898 357 aa21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 DVL1P1P54792 670 aaPredicted RBP21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 HMGN3Q15651 99 aa21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 TMEM231Q9H6L2 316 aa21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 FSCN3Q9NQT6 498 aa21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 FAM212BQ9NTI7 297 aaPredicted RBP21.37■■□□□ 1.01
SYNGAP1-206ENST00000479510 TRIOO75962 3097 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms