RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 SLC9A3R2Q15599 337 aa2.45□□□□□ -2.02
CCDC58-204ENST00000479414 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
CCDC58-204ENST00000479414 DUPD1Q68J44 220 aa2.45□□□□□ -2.02
CCDC58-204ENST00000479414 LRP11Q86VZ4 500 aa2.45□□□□□ -2.02
CCDC58-204ENST00000479414 ARHGAP18Q8N392 663 aa2.45□□□□□ -2.02
CCDC58-204ENST00000479414 OR6K6Q8NGW6 343 aa2.45□□□□□ -2.02
CCDC58-204ENST00000479414 ZBED3Q96IU2 234 aaPredicted RBP2.45□□□□□ -2.02
CCDC58-204ENST00000479414 TDRD3Q9H7E2 651 aaKnown RBP2.45□□□□□ -2.02
CCDC58-204ENST00000479414 TFR2Q9UP52 801 aa2.45□□□□□ -2.02
CCDC58-204ENST00000479414 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
CCDC58-204ENST00000479414 TRAV8-7A0A075B6U6 113 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 UPK1AO00322 258 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 P2RY2P41231 377 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 CDNFQ49AH0 187 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 LIN9Q5TKA1 542 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 KCTD16Q68DU8 428 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 OR8K3Q8NH51 312 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 TSNAXQ99598 290 aaKnown RBP2.44□□□□□ -2.02
CCDC58-204ENST00000479414 TMED9Q9BVK6 235 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 ASB7Q9H672 318 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 HMGXB4Q9UGU5 601 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 SLC22A7Q9Y694 548 aa2.44□□□□□ -2.02
CCDC58-204ENST00000479414 C4orf51C9J302 202 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 M0R1B8 84 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 IGHG2P01859 326 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 RHOCP08134 193 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 OR5AL1P0C617 328 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 TUFMP49411 452 aaKnown RBP2.43□□□□□ -2.02
CCDC58-204ENST00000479414 PSMC5P62195 406 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 RPL10AP62906 217 aaKnown RBP2.43□□□□□ -2.02
CCDC58-204ENST00000479414 FMODQ06828 376 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 TAL2Q16559 108 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 NKAIN1Q4KMZ8 207 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 DEFB134Q4QY38 66 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 LDLRAD2Q5SZI1 272 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 CLEC19AQ6UXS0 136 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 ZDHHC22Q8N966 263 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 ZNF555Q8NEP9 628 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 OR2K2Q8NGT1 345 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 ZFAND1Q8TCF1 268 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 ORAOV1Q8WV07 137 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 RNF170Q96K19 258 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 PEBP4Q96S96 227 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 MAP1LC3CQ9BXW4 147 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 RDH14Q9HBH5 336 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 OR2S2Q9NQN1 319 aa2.43□□□□□ -2.02
CCDC58-204ENST00000479414 IGKV1OR2-108A0A075B7D4 117 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 RNF113AO15541 343 aaKnown RBP2.42□□□□□ -2.02
CCDC58-204ENST00000479414 ALOX12BO75342 701 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 KCNK2O95069 426 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 OR4Q2P0C623 313 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 LGALS3P17931 250 aaKnown RBP2.42□□□□□ -2.02
CCDC58-204ENST00000479414 HLA-DMAP28067 261 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 PSMB2P49721 201 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 C6orf183Q5T699 404 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 THOC7Q6I9Y2 204 aaKnown RBP2.42□□□□□ -2.02
CCDC58-204ENST00000479414 NT5DC3Q86UY8 548 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 NT5CQ8TCD5 201 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 SMIM8Q96KF7 97 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 UTP23Q9BRU9 249 aaKnown RBP2.42□□□□□ -2.02
CCDC58-204ENST00000479414 BEX2Q9BXY8 128 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 COA1Q9GZY4 146 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 IFNKQ9P0W0 207 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 PRO0628Q9UI54 55 aa2.42□□□□□ -2.02
CCDC58-204ENST00000479414 ZNF230Q9UIE0 474 aaPredicted RBP2.42□□□□□ -2.02
CCDC58-204ENST00000479414 DHX57Q6P158 1386 aaKnown RBP2.41□□□□□ -2.02
CCDC58-204ENST00000479414 CXorf1O96002 111 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 STAG3L2P0CL84 134 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 ZNF660Q6AZW8 331 aaPredicted RBP2.41□□□□□ -2.02
CCDC58-204ENST00000479414 APOBEC3HQ6NTF7 200 aaKnown RBP2.41□□□□□ -2.02
CCDC58-204ENST00000479414 TRMT10CQ7L0Y3 403 aaKnown RBP2.41□□□□□ -2.02
CCDC58-204ENST00000479414 TMEM144Q7Z5S9 345 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 CCNYL1Q8N7R7 359 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 FAM131CQ96AQ9 280 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 OR2V2Q96R30 315 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 METTL26Q96S19 204 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 TM2D3Q9BRN9 247 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 MRPL20Q9BYC9 149 aaKnown RBP2.41□□□□□ -2.02
CCDC58-204ENST00000479414 SHCBP1LQ9BZQ2 653 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 GAL3ST2Q9H3Q3 398 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 DSN1Q9H410 356 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 C6orf50Q9HD87 102 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 LZTFL1Q9NQ48 299 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 ZNF586Q9NXT0 402 aa2.41□□□□□ -2.02
CCDC58-204ENST00000479414 CHTOPQ9Y3Y2 248 aaKnown RBP2.41□□□□□ -2.02
CCDC58-204ENST00000479414 NPHP4O75161 1426 aaPredicted RBP2.41□□□□□ -2.02
CCDC58-204ENST00000479414 ANKRD20A5PA0PJZ0 165 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 SEC14L6B5MCN3 397 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 H7C2Y5 167 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 ISLRO14498 428 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 OTCP00480 354 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 IGLV6-57P01721 117 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 HTR2CP28335 458 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 SLC6A1P30531 599 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 ACOT2P49753 483 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 KLF3P57682 345 aaPredicted RBP2.4□□□□□ -2.03
CCDC58-204ENST00000479414 TAS2R60P59551 318 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 WDR43Q15061 677 aaKnown RBP eCLIP2.4□□□□□ -2.03
CCDC58-204ENST00000479414 ELOCQ15369 112 aa2.4□□□□□ -2.03
CCDC58-204ENST00000479414 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms