RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 CD9P21926 228 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 FDFT1P37268 417 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SERPINB10P48595 397 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 CDK9P50750 372 aaKnown RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 HNRNPA3P51991 378 aaKnown RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 BIDP55957 195 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 CDH17Q12864 832 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 DAZ2Q13117 558 aaKnown RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 NAB1Q13506 487 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 KRR1Q13601 381 aaKnown RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SELPLGQ14242 412 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 FLOT2Q14254 428 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 ARL6IP1Q15041 203 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 NSDHLQ15738 373 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SYPL1Q16563 259 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 RGS21Q2M5E4 152 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 GGTA1PQ4G0N0 100 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 METTL21CQ5VZV1 264 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 DNAJC24Q6P3W2 148 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SPESP1Q6UW49 350 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 ACOT7LQ6ZUV0 252 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF720Q7Z2F6 126 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 C12orf56Q8IXR9 622 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 MKXQ8IYA7 352 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 C20orf203Q8NBC4 194 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 FBXO36Q8NEA4 188 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 FBXL13Q8NEE6 735 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 ACMSDQ8TDX5 336 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF606Q8WXB4 792 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 EFHD2Q96C19 240 aaPredicted RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 LRRC39Q96DD0 335 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SH3YL1Q96HL8 342 aaPredicted RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SLC35E1Q96K37 410 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 CNBD2Q96M20 576 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 TSGA13Q96PP4 275 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 OSBPL11Q9BXB4 747 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 UGT2B28Q9BY64 529 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 RIBC2Q9H4K1 309 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 KIR3DX1Q9H7L2 352 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SLCO1B3Q9NPD5 702 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 DAZ3Q9NR90 486 aaKnown RBP3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SLC17A5Q9NRA2 495 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 C14orf105Q9NVL8 296 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SIGLEC8Q9NYZ4 499 aa3.26□□□□□ -1.89
CCDC171-207ENST00000478913 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 NACAE9PAV3 2078 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 A0A0G2JRQ6 117 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 PSMB11A5LHX3 300 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 E9PBE3 544 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 H0YC42 278 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 H7C0C1 242 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 AP3B1O00203 1094 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 XPO1O14980 1071 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 LSM1O15116 133 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF780AO75290 641 aaPredicted RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 SERPINE1P05121 402 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 CD28P10747 220 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 ETS2P15036 469 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 ATP5OP48047 213 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 GCLMP48507 274 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 CASP4P49662 377 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 DAP3P51398 398 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 SSR4P51571 173 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 BASP1P80723 227 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF829Q3KNS6 432 aaPredicted RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 THOC7Q6I9Y2 204 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 SPOPLQ6IQ16 392 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 PYHIN1Q6K0P9 492 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 NIPAL1Q6NVV3 410 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 PRMT9Q6P2P2 845 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 TTC33Q6PID6 262 aaPredicted RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 RNF165Q6ZSG1 346 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 ZDHHC21Q8IVQ6 265 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 BBS5Q8N3I7 341 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 TMEM35BQ8NCS4 154 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 ZNF420Q8TAQ5 688 aaPredicted RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 S100ZQ8WXG8 99 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 THRSPQ92748 146 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 DCUN1D1Q96GG9 259 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 C7orf34Q96L11 122 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 NAT9Q9BTE0 207 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 ALG12Q9BV10 488 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 EFCAB1Q9HAE3 211 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 ETNK2Q9NVF9 386 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 DDX18Q9NVP1 670 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 DMAC2Q9NW81 257 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 GIN1Q9NXP7 522 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 UBAP1Q9NZ09 502 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 CHRNA9Q9UGM1 479 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 SLC7A8Q9UHI5 535 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 PRO0461Q9UI25 63 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 PTBP2Q9UKA9 531 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 NEU3Q9UQ49 428 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 RASD1Q9Y272 281 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 AK6Q9Y3D8 172 aaKnown RBP3.25□□□□□ -1.89
CCDC171-207ENST00000478913 N6AMT1Q9Y5N5 214 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 SCN3AQ9NY46 2000 aa3.25□□□□□ -1.89
CCDC171-207ENST00000478913 A0A1B0GVG6 124 aa3.24□□□□□ -1.89
CCDC171-207ENST00000478913 LINC00854A0A1B0GVQ3 168 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms