RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 NDUFA11Q86Y39 141 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 C11orf42Q8N5U0 333 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 OR4F17Q8NGA8 305 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 OR13D1Q8NGV5 346 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 TRMT10AQ8TBZ6 339 aaKnown RBP10.72□□□□□ -0.69
VCL-205ENST00000478896 SGCDQ92629 289 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 R3HDM4Q96D70 268 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 OR4F4Q96R69 305 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 CNN2Q99439 309 aaKnown RBP10.72□□□□□ -0.69
VCL-205ENST00000478896 PITPNC1Q9UKF7 332 aa10.72□□□□□ -0.69
VCL-205ENST00000478896 TBL2Q9Y4P3 447 aaKnown RBP10.72□□□□□ -0.69
VCL-205ENST00000478896 MEX3AA1L020 520 aaKnown RBP10.71□□□□□ -0.69
VCL-205ENST00000478896 CCDC182A6NF36 153 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 A6NIN4 97 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 VGLL3A8MV65 326 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 PRR32B1ATL7 298 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 DLGAP1O14490 977 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 RAB13P51153 203 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 CXCR4P61073 352 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 ACTR3P61158 418 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 ROM1Q03395 351 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 COL10A1Q03692 680 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 EMX1Q04741 257 aaPredicted RBP10.71□□□□□ -0.69
VCL-205ENST00000478896 DYNC1I2Q13409 638 aaKnown RBP10.71□□□□□ -0.69
VCL-205ENST00000478896 SSX2Q16385 188 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 PLEKHG7Q6ZR37 379 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 GDPD3Q7L5L3 318 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 CALHM1Q8IU99 346 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 DYNAPQ8N1N2 210 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 PIFOQ8TCI5 191 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 OR5M11Q96RB7 305 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 NRIP2Q9BQI9 281 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 CDCA4Q9BXL8 241 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 PRRG3Q9BZD7 231 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 PRSS22Q9GZN4 317 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 MMP28Q9H239 520 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 PLEKHA1Q9HB21 404 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 SLC22A13Q9Y226 551 aa10.71□□□□□ -0.69
VCL-205ENST00000478896 PQLC2LA1A4F0 135 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 AQP12BA6NM10 295 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 C17orf98A8MV24 154 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 F2RL2O00254 374 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 NOS1APO75052 506 aaPredicted RBP10.7□□□□□ -0.7
VCL-205ENST00000478896 HOXB6P17509 224 aaKnown RBP10.7□□□□□ -0.7
VCL-205ENST00000478896 OR12D2P58182 307 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 CBX1P83916 185 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 TMEM42Q69YG0 159 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 ZNF322Q6U7Q0 402 aaPredicted RBP10.7□□□□□ -0.7
VCL-205ENST00000478896 CCBE1Q6UXH8 406 aaPredicted RBP10.7□□□□□ -0.7
VCL-205ENST00000478896 SPATA24Q86W54 205 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 AQP12AQ8IXF9 295 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 SLC35F2Q8IXU6 374 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 MALSU1Q96EH3 234 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 CITED2Q99967 270 aaPredicted RBP10.7□□□□□ -0.7
VCL-205ENST00000478896 HES4Q9HCC6 221 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 PAPOLBQ9NRJ5 636 aaKnown RBP10.7□□□□□ -0.7
VCL-205ENST00000478896 SERTAD4Q9NUC0 356 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 NECAP2Q9NVZ3 263 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 H2AFY2Q9P0M6 372 aaPredicted RBP10.7□□□□□ -0.7
VCL-205ENST00000478896 OR52A1Q9UKL2 312 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 R4GMQ9 66 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 V9GYS6 101 aa10.7□□□□□ -0.7
VCL-205ENST00000478896 DSCAML1Q8TD84 2053 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 FAM230AA0A1W2PPH8 454 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 MEGF11A6BM72 1044 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 A6NDX4 124 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 FAM90A8PA6NJQ4 464 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ODF3BA8MYP8 253 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ZNF670-ZNF695F2Z2N8 137 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 K7N7A8 449 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ALDOBP05062 364 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 CHRM2P08172 466 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ZNF728P0DKX0 622 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 IGHV1-8P0DP01 117 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 MPZP25189 248 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 VDAC2P45880 294 aaPredicted RBP10.69□□□□□ -0.7
VCL-205ENST00000478896 CRISP1P54107 249 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 LOXL3P58215 753 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 IL24Q13007 206 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 EDDM3AQ14507 147 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ODF4Q2M2E3 257 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ZNF626Q68DY1 528 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ANGPTL5Q86XS5 388 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ELMOD2Q8IZ81 293 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 Q8N2B8 174 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 OR14K1Q8NGZ2 314 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 DNAJC9Q8WXX5 260 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 PHF21AQ96BD5 680 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ZNF714Q96N38 554 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 APOL4Q9BPW4 351 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 PKIBQ9C010 78 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 AURKAIP1Q9NWT8 199 aaPredicted RBP10.69□□□□□ -0.7
VCL-205ENST00000478896 SLC7A11Q9UPY5 501 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 ZNF281Q9Y2X9 895 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 HILPDAQ9Y5L2 63 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 SNX5Q9Y5X3 404 aa10.69□□□□□ -0.7
VCL-205ENST00000478896 A0A1W2PRX2 142 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 H3BSH0 61 aa10.68□□□□□ -0.7
VCL-205ENST00000478896 MAGEB4O15481 346 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms