RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ANGPTL5Q86XS5 388 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 SGMS2Q8NHU3 365 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 RDH12Q96NR8 316 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 ZNF649Q9BS31 505 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 FAM234AQ9H0X4 552 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 SIRT7Q9NRC8 400 aa19.2■□□□□ 0.66
C9orf3-215ENST00000478473 LOC100130705A0A1B0GUX0 176 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 NXPH2O95156 264 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 SERPINA3P01011 423 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 IGHA1P01876 353 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 DBTP11182 482 aaKnown RBP19.19■□□□□ 0.66
C9orf3-215ENST00000478473 IER3P46695 156 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 UBE2E1P51965 193 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 NANOS3P60323 173 aaKnown RBP19.19■□□□□ 0.66
C9orf3-215ENST00000478473 ACTA2P62736 377 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 ACTG2P63267 376 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 ZNF91Q05481 1191 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 SHISA2Q6UWI4 295 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 SYS1Q8N2H4 156 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 TMEM185AQ8NFB2 350 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 TBC1D15Q8TC07 691 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 PELI1Q96FA3 418 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 Q96MT0 163 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 MYCBPQ99417 103 aaPredicted RBP19.19■□□□□ 0.66
C9orf3-215ENST00000478473 CHIAQ9BZP6 476 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 FAM118AQ9NWS6 357 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 MTCH1Q9NZJ7 389 aa19.19■□□□□ 0.66
C9orf3-215ENST00000478473 CAB39Q9Y376 341 aaPredicted RBP19.19■□□□□ 0.66
C9orf3-215ENST00000478473 FAM181BA6NEQ2 426 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 SLC1A7O00341 560 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 NDUFA7O95182 113 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 ACSM1Q08AH1 577 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 GALEQ14376 348 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 RDH10Q8IZV5 341 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 C11orf42Q8N5U0 333 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 OR5D13Q8NGL4 314 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 ADAT3Q96EY9 351 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-215ENST00000478473 SLITRK2Q9H156 845 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 ELL3Q9HB65 397 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-215ENST00000478473 INPP5EQ9NRR6 644 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 AASSQ9UDR5 926 aa19.18■□□□□ 0.66
C9orf3-215ENST00000478473 IGKV1-9A0A0C4DH69 117 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 A0A1B0GUS0 222 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 OR4C45A6NMZ5 311 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 NPFFO15130 113 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 EEF1B2P24534 225 aaKnown RBP19.17■□□□□ 0.66
C9orf3-215ENST00000478473 RAB40BQ12829 278 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 BLMHQ13867 455 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 CNN3Q15417 329 aaKnown RBP19.17■□□□□ 0.66
C9orf3-215ENST00000478473 HCP5Q6MZN7 132 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 TRMT10AQ8TBZ6 339 aaKnown RBP19.17■□□□□ 0.66
C9orf3-215ENST00000478473 DYRK2Q92630 601 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 MRPL48Q96GC5 212 aaKnown RBP19.17■□□□□ 0.66
C9orf3-215ENST00000478473 C19orf12Q9NSK7 152 aa19.17■□□□□ 0.66
C9orf3-215ENST00000478473 FAM230AA0A1W2PPH8 454 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 A0A1W2PQ09 198 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 K7N7A8 449 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 ZNF737O75373 536 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 FADS2O95864 444 aaKnown RBP19.16■□□□□ 0.66
C9orf3-215ENST00000478473 TK1P04183 234 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 RPSAP08865 295 aaKnown RBP19.16■□□□□ 0.66
C9orf3-215ENST00000478473 FBP1P09467 338 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 MRPL28Q13084 256 aaKnown RBP19.16■□□□□ 0.66
C9orf3-215ENST00000478473 BORCS8Q96FH0 119 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 C4orf36Q96KX1 117 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 CEP19Q96LK0 163 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 JAM3Q9BX67 310 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 C1RLQ9NZP8 487 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 ZNRD1Q9P1U0 126 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 HHLA2Q9UM44 414 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 MYRFQ9Y2G1 1151 aa19.16■□□□□ 0.66
C9orf3-215ENST00000478473 F8VVB4 439 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 F8VWA3 439 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 MT-ND2P03891 347 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 HTR1AP08908 422 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 RBP2P50120 134 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 RPL31P62899 125 aaKnown RBP19.15■□□□□ 0.66
C9orf3-215ENST00000478473 RELBQ01201 579 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 ALKBH1Q13686 389 aaKnown RBP19.15■□□□□ 0.66
C9orf3-215ENST00000478473 LPCAT4Q643R3 524 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 TMEM200BQ69YZ2 307 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 FIP1L1Q6UN15 594 aaKnown RBP19.15■□□□□ 0.66
C9orf3-215ENST00000478473 PDZD9Q8IXQ8 264 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 Q8IYB0 196 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 APH1BQ8WW43 257 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 SPSB1Q96BD6 273 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 DPAGT1Q9H3H5 408 aa19.15■□□□□ 0.66
C9orf3-215ENST00000478473 A0A1W2PPH5 198 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 H3BSH0 61 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 J3QLW9 94 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 ALX3O95076 343 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 IGHV4-59P01825 116 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 CHRM2P08172 466 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 ZNF19P17023 458 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 ATF1P18846 271 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 PRKACBP22694 351 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 KLRD1Q13241 179 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 ZSCAN26Q16670 478 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 MIDNQ504T8 468 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 HAVCR2Q8TDQ0 301 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms