RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 NANPQ8TBE9 248 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 GNPNAT1Q96EK6 184 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-208ENST00000478423 UHRF2Q96PU4 802 aa12.54□□□□□ -0.4
NPHP4-208ENST00000478423 OR5B21A6NL26 309 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 PLA2G10O15496 165 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 KRASP01116 189 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 CST2P09228 141 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 TMIGD3P0DMS9 266 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-208ENST00000478423 DEFA4P12838 97 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 Q6ZRG5 221 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 OR5AP2Q8NGF4 316 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 OR6S1Q8NH40 331 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 ST8SIA2Q92186 375 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 WDR13Q9H1Z4 485 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 GPR35Q9HC97 309 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 TRPM7Q96QT4 1865 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 CHD5Q8TDI0 1954 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 ANKRD34CP0C6C1 535 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 PI4KAP42356 2102 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 CRYBA2P53672 197 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 CEBPEQ15744 281 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 SLC38A6Q8IZM9 456 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 TGIF2Q9GZN2 237 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 RPH3ALQ9UNE2 315 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
NPHP4-208ENST00000478423 CST7O76096 145 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 SP1P08047 785 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 OR13C7P0DN81 318 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 DHODHQ02127 395 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 MICBQ29980 383 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 HIST2H3PS2Q5TEC6 136 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 TSPO2Q5TGU0 170 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 LCN15Q6UWW0 184 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 NUFIP2Q7Z417 695 aaKnown RBP12.53□□□□□ -0.4
NPHP4-208ENST00000478423 MRPS24Q96EL2 167 aaKnown RBP12.53□□□□□ -0.4
NPHP4-208ENST00000478423 SPSB2Q99619 263 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 AK3Q9UIJ7 227 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 PURGQ9UJV8 347 aaKnown RBP12.53□□□□□ -0.4
NPHP4-208ENST00000478423 ANK1P16157 1881 aa12.53□□□□□ -0.4
NPHP4-208ENST00000478423 TIAF1O95411 115 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 LIMK1P53667 647 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 C11orf87Q6NUJ2 197 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 LFNGQ8NES3 379 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 ST7LQ8TDW4 575 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 FBLIM1Q8WUP2 373 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 TMEM38BQ9NVV0 291 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 TAAR3PQ9P1P4 343 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 MPC1Q9Y5U8 109 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 RFPL4AA6NLU0 287 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 ZNF724A8MTY0 619 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 RFPL4AL1F8VTS6 287 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 HMGN3Q15651 99 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 ASB13Q8WXK3 278 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 CLDN23Q96B33 292 aa12.52□□□□□ -0.4
NPHP4-208ENST00000478423 ADAT3Q96EY9 351 aaPredicted RBP12.52□□□□□ -0.4
NPHP4-208ENST00000478423 PATJQ8NI35 1801 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 TRGV10A0A0A0MS01 117 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 UPK3AO75631 287 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 RPS4Y1P22090 263 aaKnown RBP12.52□□□□□ -0.41
NPHP4-208ENST00000478423 TGIF1Q15583 401 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 STPG1Q5TH74 334 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 LAIR2Q6ISS4 152 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 THNSL2Q86YJ6 484 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 PRRX2Q99811 253 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 COMMD5Q9GZQ3 224 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 C17orf51A8MQB3 221 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 ABCD4O14678 606 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 IFITM3Q01628 133 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 ZNF816Q0VGE8 651 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-208ENST00000478423 GGTLC2Q14390 218 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 GPX7Q96SL4 187 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-208ENST00000478423 AMELYQ99218 206 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 OR2H1Q9GZK4 316 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 AICDAQ9GZX7 198 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 FN3KRPQ9HA64 309 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 LAMP3Q9UQV4 416 aa12.52□□□□□ -0.41
NPHP4-208ENST00000478423 GOLGB1Q14789 3259 aaKnown RBP12.51□□□□□ -0.41
NPHP4-208ENST00000478423 IGHV1-45A0A0A0MS14 117 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 MASP2O00187 686 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 TXNDC12O95881 172 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 TBX6O95947 436 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-208ENST00000478423 GABRA1P14867 456 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 MPGP29372 298 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 PSMB3P49720 205 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 ZP4Q12836 540 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 TMEM108Q6UXF1 575 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 DICER1Q9UPY3 1922 aaKnown RBP12.51□□□□□ -0.41
NPHP4-208ENST00000478423 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 IGLV3-21P80748 117 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-208ENST00000478423 RTL8BQ17RB0 113 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 OR10V1Q8NGI7 309 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 BORCS7Q96B45 105 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 DAZAP1Q96EP5 407 aaKnown RBP12.51□□□□□ -0.41
NPHP4-208ENST00000478423 LOXL4Q96JB6 756 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 TMEM231Q9H6L2 316 aa12.51□□□□□ -0.41
NPHP4-208ENST00000478423 ESRP2Q9H6T0 727 aaKnown RBP12.51□□□□□ -0.41
NPHP4-208ENST00000478423 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms