RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 HLA-DQA2P01906 255 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 ELANEP08246 267 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 OR8U8P0C7N1 319 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM106CPP0CH98 169 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 CFL1P23528 166 aaKnown RBP5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 MAP2K3P46734 347 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 YAP1P46937 504 aaKnown RBP5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 GPM6AP51674 278 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 RPS6KA3P51812 740 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 ARHGDIBP52566 201 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 SLC18A1P54219 525 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 GPR50Q13585 617 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 KIAA0141Q14154 515 aaPredicted RBP5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 TRAM2Q15035 370 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 SNCBQ16143 134 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 TIGD6Q17RP2 521 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 TMEM177Q53S58 311 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 NANOGP8Q6NSW7 305 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF730Q6ZMV8 503 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 KRT74Q7RTS7 529 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 DCXRQ7Z4W1 244 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 SLC35E3Q7Z769 313 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 FOXRED2Q8IWF2 684 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 ABHD12Q8N2K0 398 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 FTMTQ8N4E7 242 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 LINC00471Q8N535 108 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF676Q8N7Q3 588 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 OR4C15Q8NGM1 316 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 OR1N2Q8NGR9 330 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 PIGCQ92535 297 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 NRIP2Q9BQI9 281 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 ROPN1BQ9BZX4 212 aaPredicted RBP5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 NDEL1Q9GZM8 345 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 NSRP1Q9H0G5 558 aaKnown RBP5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 ROPN1Q9HAT0 212 aaPredicted RBP5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 RPRD1BQ9NQG5 326 aaKnown RBP5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 GFOD1Q9NXC2 390 aa5.67□□□□□ -1.5
SPTLC1-205ENST00000477888 ARRDC5A6NEK1 342 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF732B4DXR9 585 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 H3BSH0 61 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 I3L521 148 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ARPC3O15145 178 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 FGF16O43320 207 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 NOS1APO75052 506 aaPredicted RBP5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF737O75373 536 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 DEDDO75618 318 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 HIST1H1CP16403 213 aaKnown RBP5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 FSTP19883 344 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 IFNA8P32881 189 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 POU3F4P49335 361 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 STX1BP61266 288 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ESRRGP62508 458 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 GNG3P63215 75 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 CFHR3Q02985 330 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 MEF2CQ06413 473 aaPredicted RBP5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ODF1Q14990 250 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 TAF13Q15543 124 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 SMIM21Q3B7S5 101 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 RNLSQ5VYX0 342 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 HAGHLQ6PII5 290 aaPredicted RBP5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 EPGNQ6UW88 154 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 LYPD4Q6UWN0 246 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 BAIAP2L2Q6UXY1 529 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 TIGD4Q8IY51 512 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 MREGQ8N565 214 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 POC1AQ8NBT0 407 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 OR6Q1Q8NGQ2 317 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 OR4K13Q8NH42 304 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 MYOZ3Q8TDC0 251 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNRF4Q8WWF5 429 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 LZICQ8WZA0 190 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 DCUN1D4Q92564 292 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 SLAMF6Q96DU3 332 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF488Q96MN9 340 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ERMAPQ96PL5 475 aaPredicted RBP5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 ST6GALNAC5Q9BVH7 336 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 FNDC11Q9BVV2 318 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 GON7Q9BXV9 100 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 HIPK2Q9H2X6 1198 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 RGCCQ9H4X1 137 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 RETNQ9HD89 108 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 CENPMQ9NSP4 180 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 VPS13DQ5THJ4 4388 aa5.66□□□□□ -1.5
SPTLC1-205ENST00000477888 TVP23AA6NH52 213 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 BUB1B-PAK6H3BSN5 160 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 AP4M1O00189 453 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 OVOL1O14753 267 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 GSTA4O15217 222 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 RENP00797 406 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 IFNA14P01570 189 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 IGHG4P01861 327 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 ANXA2P07355 339 aaKnown RBP5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 PSMB8P28062 276 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 OMPP47874 163 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 CX3CR1P49238 355 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 EDDM3BP56851 147 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 SCAND1P57086 179 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 SELENOWP63302 87 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 RUNX1Q01196 453 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms