RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 PSG7Q13046 419 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 TAF13Q15543 124 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 SSX1Q16384 188 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 TIMM50Q3ZCQ8 353 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 CCDC58Q4VC31 144 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 PABPC1L2AQ5JQF8 200 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 ZNF684Q5T5D7 378 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 GPR107Q5VW38 600 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 DEGS2Q6QHC5 323 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 ARL9Q6T311 187 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 ZNF841Q6ZN19 808 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 Q6ZR03 302 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 SYT9Q86SS6 491 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 NDUFA11Q86Y39 141 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 OR4C13Q8NGP0 309 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 POM121L2Q96KW2 1035 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 ATF6BQ99941 703 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 FUNDC2Q9BWH2 189 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 MOB1AQ9H8S9 216 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 ENPP5Q9UJA9 477 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 RPUSD1Q9UJJ7 312 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 GTF2A1LQ9UNN4 478 aa7.96□□□□□ -1.14
SMARCB1-206ENST00000477836 LOC100509620A0A075B734 347 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 TRBV2A0A0J9YWF9 115 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 ADARB2-AS1A8MUL3 147 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 E9PI62 339 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 LOC110117498-PIK3R3F6TDL0 507 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 H3BSA7 217 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 RER1O15258 196 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 SGCEO43556 437 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 MMP7P09237 267 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 ZNF32P17041 273 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 CELP19835 753 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 GADD45AP24522 165 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 PSMA1P25786 263 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 PSMB10P40306 273 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 HTR5AP47898 357 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 GDI2P50395 445 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 GTF2A1P52655 376 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 ARF6P62330 175 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 HIST1H3AP68431 136 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 DCTN2Q13561 401 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 TPBGQ13641 420 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 FAM201AQ5SY85 155 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 HIST2H3PS2Q5TEC6 136 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 CD276Q5ZPR3 534 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 RPL22L1Q6P5R6 122 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 HIST2H3AQ71DI3 136 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 PNLDC1Q8NA58 520 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 OR5R1Q8NH85 324 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 RAB2BQ8WUD1 216 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 SPTSSAQ969W0 71 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 ISOC1Q96CN7 298 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 SMIM19Q96E16 107 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 C4orf45Q96LM5 186 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 CITED2Q99967 270 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 TMED9Q9BVK6 235 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 OR2H1Q9GZK4 316 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 SIRPDQ9H106 197 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 NIPAL2Q9H841 368 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 ELOVL3Q9HB03 270 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 PNRC2Q9NPJ4 139 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 RSL24D1Q9UHA3 163 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 TIMM10BQ9Y5J6 103 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 CEPT1Q9Y6K0 416 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 R4GMQ9 66 aa7.95□□□□□ -1.14
SMARCB1-206ENST00000477836 PLECQ15149 4684 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 IGHV3-64DA0A0J9YX35 117 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 IFNL4K9M1U5 179 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 ZNF701M0R085 212 aaPredicted RBP7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 AIREO43918 545 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 DCTDP32321 178 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 CX3CR1P49238 355 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 TMBIM6P55061 237 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 MFGE8Q08431 387 aaPredicted RBP7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 ECH1Q13011 328 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 GPR50Q13585 617 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 TRAM1Q15629 374 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 CCDC92Q53HC0 331 aaPredicted RBP7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 BCL2L15Q5TBC7 163 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 DMKNQ6E0U4 476 aaPredicted RBP7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 DCDC5Q6ZRR9 648 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 ANKRD13BQ86YJ7 626 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 ZNF676Q8N7Q3 588 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 OR1F12Q8NHA8 337 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 AKR7LQ8NHP1 331 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 RPS4Y2Q8TD47 263 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 COQ7Q99807 217 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 BCL7BQ9BQE9 202 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 CHCHD6Q9BRQ6 235 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 COMMD4Q9H0A8 199 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 PALMDQ9NP74 551 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 ATPIF1Q9UII2 106 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 STUB1Q9UNE7 303 aa7.94□□□□□ -1.14
SMARCB1-206ENST00000477836 LOC100506127A0A0U1RQW1 187 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 TMEM269A0A1B0GVZ9 245 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 A0A1W2PRD5 423 aa7.93□□□□□ -1.14
SMARCB1-206ENST00000477836 A0A1W2PRF3 423 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms