RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 PPIAL4DF5H284 164 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 KDM4BO94953 1096 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 GABARAPO95166 117 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 PPIAL4FP0DN26 164 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 MYL9P24844 172 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 MDH2P40926 338 aaKnown RBP16.7■□□□□ 0.26
ACTB-210ENST00000477812 PTGFRP43088 359 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 NPBWR2P48146 333 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 MTNR1BP49286 362 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 ZNF404Q494X3 552 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 C1orf100Q5SVJ3 147 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 PEG10Q86TG7 708 aaKnown RBP16.7■□□□□ 0.26
ACTB-210ENST00000477812 ANKRD13BQ86YJ7 626 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 MKXQ8IYA7 352 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 JAGN1Q8N5M9 183 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 BOLLQ8N9W6 283 aaKnown RBP16.7■□□□□ 0.26
ACTB-210ENST00000477812 OR4D6Q8NGJ1 314 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 OR51F2Q8NH61 342 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 TNFAIP8L1Q8WVP5 186 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 C1orf147Q96MC9 270 aaPredicted RBP16.7■□□□□ 0.26
ACTB-210ENST00000477812 KCTD7Q96MP8 289 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 GPER1Q99527 375 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 NAA50Q9GZZ1 169 aaKnown RBP16.7■□□□□ 0.26
ACTB-210ENST00000477812 TMEM165Q9HC07 324 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 GSTK1Q9Y2Q3 226 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 AK6Q9Y3D8 172 aaKnown RBP16.7■□□□□ 0.26
ACTB-210ENST00000477812 PPIAL4AQ9Y536 164 aa16.7■□□□□ 0.26
ACTB-210ENST00000477812 TNFRSF13BO14836 293 aaPredicted RBP16.69■□□□□ 0.26
ACTB-210ENST00000477812 SFTPBP07988 381 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 TMEM225BP0DP42 221 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 BCL3P20749 454 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 CFPP27918 469 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 CTF1Q16619 201 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 TMEM155Q4W5P6 130 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 SFRP4Q6FHJ7 346 aaPredicted RBP16.69■□□□□ 0.26
ACTB-210ENST00000477812 FAM166AQ6J272 317 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 FAM90A1Q86YD7 464 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 Q8NFD4 153 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 C12orf43Q96C57 262 aaKnown RBP16.69■□□□□ 0.26
ACTB-210ENST00000477812 RASL12Q9NYN1 266 aa16.69■□□□□ 0.26
ACTB-210ENST00000477812 FLNAP21333 2647 aaKnown RBP16.68■□□□□ 0.26
ACTB-210ENST00000477812 ZNF469Q96JG9 3925 aaPredicted RBP16.68■□□□□ 0.26
ACTB-210ENST00000477812 IGHV3OR15-7A0A075B7D8 119 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 A0A0G2JK05 382 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 SLC22A1O15245 554 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 MUC1P15941 1255 aaPredicted RBP16.68■□□□□ 0.26
ACTB-210ENST00000477812 GLRA1P23415 457 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 TGFBR1P36897 503 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 OR10A3P58181 314 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 GMFBP60983 142 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 GPR107Q5VW38 600 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 GLT8D1Q68CQ7 371 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 STUMQ69YW2 141 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 SPNS3Q6ZMD2 512 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 ACP7Q6ZNF0 438 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 BATF2Q8N1L9 274 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 PNLDC1Q8NA58 520 aaKnown RBP16.68■□□□□ 0.26
ACTB-210ENST00000477812 FOXRED1Q96CU9 486 aaPredicted RBP16.68■□□□□ 0.26
ACTB-210ENST00000477812 TMEM246Q9BRR3 403 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 FAM192AQ9GZU8 254 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 SMURF1Q9HCE7 757 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 RBFOX1Q9NWB1 397 aaKnown RBP16.68■□□□□ 0.26
ACTB-210ENST00000477812 IL36GQ9NZH8 169 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 CELSR1Q9NYQ6 3014 aa16.68■□□□□ 0.26
ACTB-210ENST00000477812 TRAV38-1A0A0B4J264 116 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 NXPH2O95156 264 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 CDRT1O95170 752 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 CYB5AP00167 134 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 AMY2BP19961 511 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 SDC2P34741 201 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 SMIM21Q3B7S5 101 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 ELP2Q6IA86 826 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 Q8IYB0 196 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 MUC20Q8N307 709 aaPredicted RBP16.67■□□□□ 0.26
ACTB-210ENST00000477812 DEFB108BQ8NET1 73 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 CLDND2Q8NHS1 167 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 SLC25A28Q96A46 364 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 REG4Q9BYZ8 158 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 RHOFQ9HBH0 211 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 NLKQ9UBE8 527 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 ZNF222Q9UK12 451 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 MRPS28Q9Y2Q9 187 aaKnown RBP16.67■□□□□ 0.26
ACTB-210ENST00000477812 V9GY05 133 aa16.67■□□□□ 0.26
ACTB-210ENST00000477812 IGKV1D-17A0A075B6S4 117 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 ISPDA4D126 451 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 CEACAM18A8MTB9 384 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 RNF223E7ERA6 249 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 TRAPPC2LH3BP13 241 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 SLC17A2O00624 439 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 PDCD5O14737 125 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 RAB3BP20337 219 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 USF1P22415 310 aaPredicted RBP16.66■□□□□ 0.26
ACTB-210ENST00000477812 LMO4P61968 165 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 NCS1P62166 190 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 LSM3P62310 102 aaKnown RBP16.66■□□□□ 0.26
ACTB-210ENST00000477812 LOXL1Q08397 574 aaPredicted RBP16.66■□□□□ 0.26
ACTB-210ENST00000477812 MICBQ29980 383 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 TPRA1Q86W33 373 aa16.66■□□□□ 0.26
ACTB-210ENST00000477812 CIARTQ8N365 385 aaPredicted RBP16.66■□□□□ 0.26
ACTB-210ENST00000477812 OR6M1Q8NGM8 313 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms