RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MYOZ1Q9NP98 299 aaPredicted RBP13.63□□□□□ -0.23
VHL-203ENST00000477538 MTCH1Q9NZJ7 389 aa13.63□□□□□ -0.23
VHL-203ENST00000477538 STEAP1Q9UHE8 339 aa13.63□□□□□ -0.23
VHL-203ENST00000477538 ING4Q9UNL4 249 aa13.63□□□□□ -0.23
VHL-203ENST00000477538 PRRC2AP48634 2157 aaKnown RBP13.62□□□□□ -0.23
VHL-203ENST00000477538 SRRM5B3KS81 715 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 TMEM178BH3BS89 294 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 KDM4BO94953 1096 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 ACAA1P09110 424 aaPredicted RBP13.62□□□□□ -0.23
VHL-203ENST00000477538 SLC2A2P11168 524 aaPredicted RBP13.62□□□□□ -0.23
VHL-203ENST00000477538 EGR1P18146 543 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 BCL3P20749 454 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 RANBP1P43487 201 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 CLDN12P56749 244 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 P2RY14Q15391 338 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 RSU1Q15404 277 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 CARTPTQ16568 116 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 ASCL4Q6XD76 172 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 CROCCP3Q8IVE0 287 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 ZNF525Q8N782 197 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 TBC1D15Q8TC07 691 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 SLC25A28Q96A46 364 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 SLC25A46Q96AG3 418 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 NRIP2Q9BQI9 281 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 METTL9Q9H1A3 318 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 CHODLQ9H9P2 273 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 DAPK2Q9UIK4 370 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 DSCAML1Q8TD84 2053 aa13.62□□□□□ -0.23
VHL-203ENST00000477538 YLPM1P49750 1951 aaKnown RBP13.62□□□□□ -0.23
VHL-203ENST00000477538 CLDN25C9JDP6 229 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 WNT9BO14905 357 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 NOS1APO75052 506 aaPredicted RBP13.61□□□□□ -0.23
VHL-203ENST00000477538 BPNT1O95861 308 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 LHBP01229 141 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 UBBP0CG47 229 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 GLRA1P23415 457 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 CD80P33681 288 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 NPBWR2P48146 333 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 GMFBP60983 142 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 ERVK11-1P61568 191 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 HOXA4Q00056 320 aaPredicted RBP13.61□□□□□ -0.23
VHL-203ENST00000477538 IDNKQ5T6J7 187 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 Q8IYB0 196 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 LRRC75A-AS1Q8N1F1 130 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 OR10K1Q8NGX5 313 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 C1orf147Q96MC9 270 aaPredicted RBP13.61□□□□□ -0.23
VHL-203ENST00000477538 BARHL1Q9BZE3 327 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 IL36GQ9NZH8 169 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 GHRLQ9UBU3 117 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 NPTNQ9Y639 398 aa13.61□□□□□ -0.23
VHL-203ENST00000477538 ASH1LQ9NR48 2969 aaKnown RBP13.61□□□□□ -0.23
VHL-203ENST00000477538 A0A0B4J203 849 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 C3orf80F5H4A9 247 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 F8VVB4 439 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 F8VWA3 439 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 ZNF780AO75290 641 aaPredicted RBP13.6□□□□□ -0.23
VHL-203ENST00000477538 NXPH2O95156 264 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 HTR3BO95264 441 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 SFTPBP07988 381 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 CSF3P09919 207 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 SERPINA2P20848 420 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 PDLIM4P50479 330 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 RORCP51449 518 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 GPR176Q14439 515 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 DGUOKQ16854 277 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 SLC22A6Q4U2R8 563 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 FAM201AQ5SY85 155 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 PEG10Q86TG7 708 aaKnown RBP13.6□□□□□ -0.23
VHL-203ENST00000477538 OR51D1Q8NGF3 324 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 DYNC2LI1Q8TCX1 351 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 EMG1Q92979 244 aaKnown RBP13.6□□□□□ -0.23
VHL-203ENST00000477538 FAM3DQ96BQ1 224 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 WDR13Q9H1Z4 485 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 KCNK15Q9H427 330 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 LIN7BQ9HAP6 207 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 RHOFQ9HBH0 211 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 HES4Q9HCC6 221 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 RBFOX1Q9NWB1 397 aaKnown RBP13.6□□□□□ -0.23
VHL-203ENST00000477538 RASL12Q9NYN1 266 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 PDZD2O15018 2839 aa13.6□□□□□ -0.23
VHL-203ENST00000477538 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.59□□□□□ -0.23
VHL-203ENST00000477538 PPIHO43447 177 aaKnown RBP13.59□□□□□ -0.23
VHL-203ENST00000477538 TMEM127O75204 238 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 ZNF205O95201 554 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 CSTBP04080 98 aaKnown RBP13.59□□□□□ -0.23
VHL-203ENST00000477538 ARSBP15848 533 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 CAPZA1P52907 286 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 TMEM33P57088 247 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 SMIM21Q3B7S5 101 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 ELP2Q6IA86 826 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 CLEC2AQ6UVW9 174 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 ACP7Q6ZNF0 438 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 FAM58AQ8N1B3 248 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 C19orf18Q8NEA5 215 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 TIMD4Q96H15 378 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 PCDHB16Q9NRJ7 776 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 CCDC59Q9P031 241 aaKnown RBP13.59□□□□□ -0.23
VHL-203ENST00000477538 DNAJB11Q9UBS4 358 aa13.59□□□□□ -0.23
VHL-203ENST00000477538 FLNBO75369 2602 aaKnown RBP13.59□□□□□ -0.23
VHL-203ENST00000477538 CR1P17927 2039 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms