RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TDGF1P3P51864 188 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SMSP52788 366 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 CRISP1P54107 249 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 CDC42P60953 191 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 RAP1BP61224 184 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 ESRRGP62508 458 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 RAP1AP62834 184 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 MYBPC1Q00872 1141 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 RPL18Q07020 188 aaKnown RBP3.01□□□□□ -1.93
UBR3-209ENST00000477461 PUDPQ08623 228 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 NPRL3Q12980 569 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 GINS1Q14691 196 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 PON3Q15166 354 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 ECSCRQ19T08 205 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 AARDQ4LEZ3 155 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 PRR30Q53SZ7 412 aaPredicted RBP3.01□□□□□ -1.93
UBR3-209ENST00000477461 CLEC12AQ5QGZ9 265 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 C1orf185Q5T7R7 199 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 TTC23Q5W5X9 447 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 KDM4DQ6B0I6 523 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 OR2A2Q6IF42 318 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 FAHD1Q6P587 224 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 IZUMO2Q6UXV1 221 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 DPY19L2P2Q6ZN68 376 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 ZNF620Q6ZNG0 422 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 Q6ZVH6 145 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SLC35D2Q76EJ3 337 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 NUFIP2Q7Z417 695 aaKnown RBP3.01□□□□□ -1.93
UBR3-209ENST00000477461 ZNF100Q8IYN0 542 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 PARP8Q8N3A8 854 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 DHRSXQ8N5I4 330 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 LRRC17Q8N6Y2 441 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 CLDN22Q8N7P3 220 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 ST6GALNAC3Q8NDV1 305 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 OR2T33Q8NG76 320 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 GPR148Q8TDV2 347 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 BCL2L2Q92843 193 aaPredicted RBP3.01□□□□□ -1.93
UBR3-209ENST00000477461 SAMD8Q96LT4 415 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 LINC00167Q96N53 147 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 RDH12Q96NR8 316 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 OXGR1Q96P68 337 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 ERMAPQ96PL5 475 aaPredicted RBP3.01□□□□□ -1.93
UBR3-209ENST00000477461 RCHY1Q96PM5 261 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SLC38A2Q96QD8 506 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 RAB40CQ96S21 281 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SLC29A1Q99808 456 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 APOL4Q9BPW4 351 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 NIPSNAP1Q9BPW8 284 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 CACNG6Q9BXT2 260 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SRXN1Q9BYN0 137 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SP140LQ9H930 580 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 MARCH7Q9H992 704 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 MCCC2Q9HCC0 563 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 GLRX2Q9NS18 164 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 IMPAD1Q9NX62 359 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 IL20Q9NYY1 176 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 IL20RAQ9UHF4 553 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 SH3BGRL2Q9UJC5 107 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 KLHL21Q9UJP4 597 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 FOXA2Q9Y261 457 aaPredicted RBP3.01□□□□□ -1.93
UBR3-209ENST00000477461 SIGLEC7Q9Y286 467 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 GMPPBQ9Y5P6 360 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 IER3IP1Q9Y5U9 82 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 COL6A6A6NMZ7 2263 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 ESPL1Q14674 2120 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 AKAP13Q12802 2813 aa3.01□□□□□ -1.93
UBR3-209ENST00000477461 PHF3Q92576 2039 aaKnown RBP3□□□□□ -1.93
UBR3-209ENST00000477461 SPTA1P02549 2419 aa3□□□□□ -1.93
UBR3-209ENST00000477461 USP34Q70CQ2 3546 aa3□□□□□ -1.93
UBR3-209ENST00000477461 SHANK1Q9Y566 2161 aa3□□□□□ -1.93
UBR3-209ENST00000477461 LOC100130705A0A1B0GUX0 176 aa3□□□□□ -1.93
UBR3-209ENST00000477461 LOC102725191A0A1B0GVB3 256 aa3□□□□□ -1.93
UBR3-209ENST00000477461 A0A1W2PNV4 684 aa3□□□□□ -1.93
UBR3-209ENST00000477461 OR6C65A6NJZ3 312 aa3□□□□□ -1.93
UBR3-209ENST00000477461 SNTNA6NMZ2 147 aa3□□□□□ -1.93
UBR3-209ENST00000477461 IMPA2O14732 288 aa3□□□□□ -1.93
UBR3-209ENST00000477461 MPZL2O60487 215 aa3□□□□□ -1.93
UBR3-209ENST00000477461 MRPL33O75394 65 aaKnown RBP3□□□□□ -1.93
UBR3-209ENST00000477461 SNAP29O95721 258 aa3□□□□□ -1.93
UBR3-209ENST00000477461 CD14P08571 375 aa3□□□□□ -1.93
UBR3-209ENST00000477461 IGFBP1P08833 259 aaPredicted RBP3□□□□□ -1.93
UBR3-209ENST00000477461 ZNF3P17036 446 aa3□□□□□ -1.93
UBR3-209ENST00000477461 GGT2P36268 569 aa3□□□□□ -1.93
UBR3-209ENST00000477461 GUCA1AP43080 201 aaPredicted RBP3□□□□□ -1.93
UBR3-209ENST00000477461 CSNK1A1P48729 337 aa3□□□□□ -1.93
UBR3-209ENST00000477461 AQP4P55087 323 aa3□□□□□ -1.93
UBR3-209ENST00000477461 BIDP55957 195 aa3□□□□□ -1.93
UBR3-209ENST00000477461 RPL27P61353 136 aaKnown RBP3□□□□□ -1.93
UBR3-209ENST00000477461 RPS4XP62701 263 aaKnown RBP3□□□□□ -1.93
UBR3-209ENST00000477461 ERVK-25P63136 954 aa3□□□□□ -1.93
UBR3-209ENST00000477461 H3F3AP84243 136 aa3□□□□□ -1.93
UBR3-209ENST00000477461 IL5RAQ01344 420 aa3□□□□□ -1.93
UBR3-209ENST00000477461 CD47Q08722 323 aa3□□□□□ -1.93
UBR3-209ENST00000477461 ZP4Q12836 540 aa3□□□□□ -1.93
UBR3-209ENST00000477461 KRR1Q13601 381 aaKnown RBP3□□□□□ -1.93
UBR3-209ENST00000477461 PDK3Q15120 406 aa3□□□□□ -1.93
UBR3-209ENST00000477461 PTGES3Q15185 160 aaKnown RBP3□□□□□ -1.93
UBR3-209ENST00000477461 PGGHGQ32M88 737 aa3□□□□□ -1.93
UBR3-209ENST00000477461 ACSF3Q4G176 576 aaPredicted RBP3□□□□□ -1.93
UBR3-209ENST00000477461 SLX4IPQ5VYV7 408 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms