RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 C2orf68Q2NKX9 166 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 LAMTOR1Q6IAA8 161 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 TMEM182Q6ZP80 229 aaPredicted RBP9.69□□□□□ -0.86
COL27A1-204ENST00000477421 LHFPL2Q6ZUX7 228 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 TMEM178AQ8NBL3 297 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 OR1S2Q8NGQ3 325 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 C2CD4CQ8TF44 421 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 TAAR9Q96RI9 348 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 TRIB1Q96RU8 372 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF629Q9UEG4 869 aaPredicted RBP9.69□□□□□ -0.86
COL27A1-204ENST00000477421 WISP1O95388 367 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 CA6P23280 308 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 ZP1P60852 638 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 RPL23AP62750 156 aaKnown RBP9.69□□□□□ -0.86
COL27A1-204ENST00000477421 OR8G2PQ6IF36 304 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 LRRC75AQ8NAA5 344 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 OR5AP2Q8NGF4 316 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 OR10J5Q8NHC4 309 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 SGK3Q96BR1 496 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 URGCP-MRPS24S4R325 110 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 MYO7BQ6PIF6 2116 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 CHD7Q9P2D1 2997 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 SERPINA7P05543 415 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 PGA4P0DJD7 388 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 PGA3P0DJD8 388 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 STARD6P59095 220 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 SIGIRRQ6IA17 410 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 ZDHHC22Q8N966 263 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 SFT2D1Q8WV19 159 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 OIT3Q8WWZ8 545 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 INTS12Q96CB8 462 aaKnown RBP9.69□□□□□ -0.86
COL27A1-204ENST00000477421 KIRREL1Q96J84 757 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 SOSTQ9BQB4 213 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 FZR1Q9UM11 496 aa9.69□□□□□ -0.86
COL27A1-204ENST00000477421 CLDN1O95832 211 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 FUT3P21217 361 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 S100A2P29034 98 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 RAB5BP61020 215 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 ZDHHC23Q8IYP9 409 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 SUMF2Q8NBJ7 301 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 ADPRHL1Q8NDY3 354 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 DEFB108BQ8NET1 73 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 ST7LQ8TDW4 575 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 SPSB1Q96BD6 273 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 G6PC2Q9NQR9 355 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 GHRLQ9UBU3 117 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 KLF13Q9Y2Y9 288 aaPredicted RBP9.68□□□□□ -0.86
COL27A1-204ENST00000477421 CEBPZOSA8MTT3 80 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 ONECUT2O95948 504 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 IFNA17P01571 189 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 IGLV3-19P01714 112 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 RPS16P62249 146 aaKnown RBP9.68□□□□□ -0.86
COL27A1-204ENST00000477421 GPHA2Q96T91 129 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 GFI1Q99684 422 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 PECRQ9BY49 303 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 LPAR5Q9H1C0 372 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 LHX6Q9UPM6 363 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 DOCK10Q96BY6 2186 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 LYZL6O75951 148 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 MT-CO3P00414 261 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 CD1AP06126 327 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 OR5AC1P0C628 307 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 FUT6P51993 359 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 PNLIPRP3Q17RR3 467 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 TUSC1Q2TAM9 212 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 ALKBH6Q3KRA9 238 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF468Q5VIY5 522 aaPredicted RBP9.68□□□□□ -0.86
COL27A1-204ENST00000477421 RPL7L1Q6DKI1 246 aaKnown RBP9.68□□□□□ -0.86
COL27A1-204ENST00000477421 OR2G3Q8NGZ4 309 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 TIMP4Q99727 224 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 DHRS9Q9BPW9 319 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 FAM173AQ9BQD7 235 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 HES7Q9BYE0 225 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 NKX6-2Q9C056 277 aaPredicted RBP9.68□□□□□ -0.86
COL27A1-204ENST00000477421 SLC25A32Q9H2D1 315 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 EDARQ9UNE0 448 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 CUL9Q8IWT3 2517 aa9.68□□□□□ -0.86
COL27A1-204ENST00000477421 SLC22A20A6NK97 555 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 H3BUI4 141 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 FPR2P25090 351 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 TLE1Q04724 770 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 TRA2AQ13595 282 aaKnown RBP eCLIP9.67□□□□□ -0.86
COL27A1-204ENST00000477421 TGIF1Q15583 401 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 ADAM5Q6NVV9 412 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 OR8U1Q8NH10 309 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 HGDQ93099 445 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 ZNF837Q96EG3 531 aaPredicted RBP9.67□□□□□ -0.86
COL27A1-204ENST00000477421 GPR137Q96N19 417 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 KIF25Q9UIL4 384 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 SFT2D2O95562 160 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 LSM6P62312 80 aaKnown RBP9.67□□□□□ -0.86
COL27A1-204ENST00000477421 SSPNQ14714 243 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 RHEBQ15382 184 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 TBC1D28Q2M2D7 210 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 SOHLH1Q5JUK2 328 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 WDSUB1Q8N9V3 476 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 SLC25A31Q9H0C2 315 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 ENY2Q9NPA8 101 aa9.67□□□□□ -0.86
COL27A1-204ENST00000477421 FAM206AQ9NX38 181 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 335.6 ms