RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 C6orf201Q7Z4U5 140 aa14.3□□□□□ -0.12
TMEM53-208ENST00000476724 ZSCAN4Q8NAM6 433 aaPredicted RBP14.3□□□□□ -0.12
TMEM53-208ENST00000476724 OR2AE1Q8NHA4 323 aa14.3□□□□□ -0.12
TMEM53-208ENST00000476724 MRPS24Q96EL2 167 aaKnown RBP14.3□□□□□ -0.12
TMEM53-208ENST00000476724 C2orf50Q96LR7 162 aa14.3□□□□□ -0.12
TMEM53-208ENST00000476724 ALKBH3Q96Q83 286 aaPredicted RBP14.3□□□□□ -0.12
TMEM53-208ENST00000476724 HES7Q9BYE0 225 aa14.3□□□□□ -0.12
TMEM53-208ENST00000476724 FAM117AQ9C073 453 aa14.3□□□□□ -0.12
TMEM53-208ENST00000476724 GPR35Q9HC97 309 aa14.3□□□□□ -0.12
TMEM53-208ENST00000476724 PCDHB16Q9NRJ7 776 aa14.3□□□□□ -0.12
TMEM53-208ENST00000476724 PLA2G3Q9NZ20 509 aa14.3□□□□□ -0.12
TMEM53-208ENST00000476724 FARS2O95363 451 aaKnown RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 NRASP01111 189 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 HOXD4P09016 255 aaPredicted RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 PET100P0DJ07 73 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 PGAM2P15259 253 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 GLRA1P23415 457 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 AIMP2Q13155 320 aaKnown RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 ABHD17BQ5VST6 288 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 RPUSD3Q6P087 351 aaKnown RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 PRSS54Q6PEW0 395 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 CCDC36Q8IYA8 594 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 AKR7LQ8NHP1 331 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 PIK3IP1Q96FE7 263 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 ZNF75AQ96N20 296 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 METTL8Q9H825 291 aaKnown RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 DECR2Q9NUI1 292 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 FAM230AA0A1W2PPH8 454 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 CEACAM1P13688 526 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 TPT1P13693 172 aaKnown RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 RPS2P15880 293 aaKnown RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 PI3P19957 117 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 DTYMKP23919 212 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 CLDN15P56746 228 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 HGFACQ04756 655 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 WNT5BQ9H1J7 359 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 BARX1Q9HBU1 254 aaPredicted RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 DLL3Q9NYJ7 618 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 GPR160Q9UJ42 338 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 ANXA10Q9UJ72 324 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 MCTS1Q9ULC4 181 aaKnown RBP14.29□□□□□ -0.12
TMEM53-208ENST00000476724 MEMO1Q9Y316 297 aa14.29□□□□□ -0.12
TMEM53-208ENST00000476724 ARGFXA6NJG6 315 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 BET1O15155 118 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 XRCC2O43543 280 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 FUT6P51993 359 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 FOXO1Q12778 655 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 ANKRD55Q3KP44 614 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 MAFIPQ8WZ33 124 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 POM121Q96HA1 1249 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 IP6K3Q96PC2 410 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 IL36GQ9NZH8 169 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 ATPIF1Q9UII2 106 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 SLC7A11Q9UPY5 501 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 GVINP1Q7Z2Y8 2422 aa14.28□□□□□ -0.12
TMEM53-208ENST00000476724 LGALS8O00214 317 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 ADAP1O75689 374 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 CTSDP07339 412 aaPredicted RBP14.27□□□□□ -0.12
TMEM53-208ENST00000476724 TAGLNQ01995 201 aaKnown RBP14.27□□□□□ -0.12
TMEM53-208ENST00000476724 STK11Q15831 433 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 NKAPLQ5M9Q1 402 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 FAM74A1Q5RGS3 127 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 SKA3Q8IX90 412 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 STPG2Q8N412 459 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 FER1L6-AS2Q96M78 137 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 FAM173AQ9BQD7 235 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 LINC00470Q9BZP3 86 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 C1orf123Q9NWV4 160 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 TAS2R3Q9NYW6 316 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 DNAJB11Q9UBS4 358 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 RTTNQ86VV8 2226 aa14.27□□□□□ -0.12
TMEM53-208ENST00000476724 IGKV3D-15A0A087WSY6 115 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 hCG_38984A0A1B0GV85 526 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 IFNA2P01563 188 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 WT1P19544 449 aaPredicted RBP14.27□□□□□ -0.13
TMEM53-208ENST00000476724 PPIAP62937 165 aaKnown RBP14.27□□□□□ -0.13
TMEM53-208ENST00000476724 FAM3AP98173 230 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 OR8B8Q15620 311 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 TMPRSS7Q7RTY8 843 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 SGPP2Q8IWX5 399 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 CYYR1Q96J86 154 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 ZNF2Q9BSG1 426 aaPredicted RBP14.27□□□□□ -0.13
TMEM53-208ENST00000476724 PIGMQ9H3S5 423 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 BCO1Q9HAY6 547 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 B4GALT7Q9UBV7 327 aa14.27□□□□□ -0.13
TMEM53-208ENST00000476724 IGKV1-27A0A075B6S5 117 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 NKX2-8O15522 239 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 SPRY1O43609 319 aaPredicted RBP14.26□□□□□ -0.13
TMEM53-208ENST00000476724 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 PATE4P0C8F1 98 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 RBMXP38159 391 aaKnown RBP14.26□□□□□ -0.13
TMEM53-208ENST00000476724 RFC3P40938 356 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 IL15RAQ13261 267 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 OR1C1Q15619 314 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 TAF9Q16594 264 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 RSPO4Q2I0M5 234 aaPredicted RBP14.26□□□□□ -0.13
TMEM53-208ENST00000476724 BAP18Q8IXM2 172 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 SLC30A7Q8NEW0 376 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 SPSB4Q96A44 273 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 AQP10Q96PS8 301 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms