RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TMEM105Q8N8V8 129 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 FAM184AQ8NB25 1140 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 TSEN15Q8WW01 171 aaKnown RBP2.62□□□□□ -1.99
PTCD3-211ENST00000476215 BPIFA3Q9BQP9 254 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 CBY1Q9Y3M2 126 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 PLXNA4Q9HCM2 1894 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 DCHS1Q96JQ0 3298 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 CACNA1AO00555 2505 aa2.62□□□□□ -1.99
PTCD3-211ENST00000476215 CEP250Q9BV73 2442 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 F5P12259 2224 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 OR5H1A6NKK0 313 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 I3L4J1 428 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 M0R3G1 203 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 NME4O00746 187 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 SLC16A4O15374 487 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 CCL16O15467 120 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 DNAJB6O75190 326 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 PAHP00439 452 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 KCNE1P15382 129 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 USF1P22415 310 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-211ENST00000476215 NBL1P41271 181 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 RAB9AP51151 201 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 UBE2MP61081 183 aaKnown RBP2.61□□□□□ -1.99
PTCD3-211ENST00000476215 PPIDQ08752 370 aaKnown RBP2.61□□□□□ -1.99
PTCD3-211ENST00000476215 ILKQ13418 452 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 HTR4Q13639 388 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 ZBTB6Q15916 424 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 HORMAD1Q86X24 394 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 TMEM161BQ8NDZ6 487 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 OR1J4Q8NGS1 313 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 ITFG1Q8TB96 612 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 FGF13Q92913 245 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 HAUS1Q96CS2 278 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 TIPINQ9BVW5 301 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 CCDC94Q9BW85 323 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-211ENST00000476215 MFSD1Q9H3U5 465 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 RCL1Q9Y2P8 373 aaKnown RBP2.61□□□□□ -1.99
PTCD3-211ENST00000476215 ATG2AQ2TAZ0 1938 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 CLUHO75153 1309 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 PHLPP2Q6ZVD8 1323 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 KIAA1671Q9BY89 1806 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 NCOR2Q9Y618 2525 aa2.61□□□□□ -1.99
PTCD3-211ENST00000476215 EPG5Q9HCE0 2579 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 SPTBN2O15020 2390 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 CEP295Q9C0D2 2601 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 DOCK6Q96HP0 2047 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 KCNE1BA0A087WTH5 132 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 TSPAN11A1L157 253 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 H3BQV1 296 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 LGALS9O00182 355 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 PGA5P0DJD9 388 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 GSTM3P21266 225 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 RFC3P40938 356 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 TNFSF9P41273 254 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 SLC1A2P43004 574 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 NDUFA8P51970 172 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 ARPP19P56211 112 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 GTF2BQ00403 316 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 ANGPT1Q15389 498 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 TRMT5Q32P41 509 aaKnown RBP2.6□□□□□ -1.99
PTCD3-211ENST00000476215 YIF1BQ5BJH7 314 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 GCSAMLQ5JQS6 135 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 TEX30Q5JUR7 227 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 LIN9Q5TKA1 542 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 H3F3CQ6NXT2 135 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 PQLC3Q8N755 202 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 OR56A4Q8NGH8 313 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 CLDN23Q96B33 292 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 TCEAL4Q96EI5 215 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 BTN2A3PQ96KV6 586 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 TMEM243Q9BU79 118 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 PIGUQ9H490 435 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 RHBDL2Q9NX52 303 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 DCAF16Q9NXF7 216 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 C21orf62Q9NYP8 219 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 SAR1BQ9Y6B6 198 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 OTOGLQ3ZCN5 2332 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 TPRP12270 2363 aaKnown RBP2.6□□□□□ -1.99
PTCD3-211ENST00000476215 LAMA1P25391 3075 aa2.6□□□□□ -1.99
PTCD3-211ENST00000476215 CHD8Q9HCK8 2581 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 CHD6Q8TD26 2715 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 IGHV3-72A0A0B4J1Y9 119 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 IGHV3OR16-9A0A0B4J2B5 98 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 WRBO00258 174 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 TNFRSF11BO00300 401 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 PIRO00625 290 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 POLR1CO15160 346 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-211ENST00000476215 CACNG3O60359 315 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 HLA-HP01893 362 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 PGA4P0DJD7 388 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 PGA3P0DJD8 388 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 CXCL8P10145 99 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 PFN2P35080 140 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 CCR2P41597 374 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 SPAG1Q07617 926 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 PNOCQ13519 176 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 ZNF829Q3KNS6 432 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-211ENST00000476215 ZNF720Q7Z2F6 126 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 CD302Q8IX05 232 aa2.59□□□□□ -1.99
PTCD3-211ENST00000476215 OFCC1Q8IZS5 231 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms